Vitis vinifera (wine grape): 100249421
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Entry
100249421 CDS
T01084
Name
(RefSeq) disease resistance protein RUN1
Organism
vvi
Vitis vinifera (wine grape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
TIR_2
C-JID
LRR_8
LRR_4
NACHT
LRR_3
AAA
ATPase_2
AAA_22
nSTAND3
AAA_18
ABC_tran
RsgA_GTPase
AAA_14
AAA_16
Motif
Other DBs
NCBI-GeneID:
100249421
NCBI-ProteinID:
XP_059592934
LinkDB
All DBs
Position
5:complement(join(11373282..11373947,11374020..11374519,11374612..11374714,11374804..11375103,11375247..11376324,11376881..11377383))
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AA seq
1049 aa
AA seq
DB search
MASSSTHRASSSTTSISRNYDVFLSFRGGDTRRNFTDHLYTTLTASGIQTFRDDEELEKG
GDIASDLLRAIEESRFFIIVFSKNYAYSRWCLNELVKIIERKSQKESVVLPIFYHVDPSD
VRNQRGSFGEALAYHERDANQEKKEMVQKWRIALTKAAYLSGCHVDDQYETEVVKEIVNT
IIRRLNRQPLSVGKNIVGISVHLEKLKSLMNTELNEVRVIGICGTGGVGKTTIAKAIYNE
ISCQYDGSSFLRNMRERSKGDILQLQQELLHGILRGKFFKINTVDEGISMIKRCLSSNRV
LIIFDDVDELKQLEYLAEEKDWFQAKSTIIITSRDKHVLARYGVDIPYEVSKLNKEEAIE
LFSLWAFKQNHPKEVYKNLSYNIIDYANGLPLALKVLGASLFGKKISEWESAMCKLKIIP
HMEIHNVLRISFDGLDDVDKGIFLDVACFFKGDDKYFVSRILGPHAKHGITTLADRCLIT
VSKNRLDMHDLIQQMGWEIIRQECPKDPGRRSRLWDSNAYHVLIRNMGTQAIEGLFLDRC
KFNPSQLTMESFKEMNKLRLLKIHNPRRKLFLENHLPRDFEFSAYELRYLHWDGYPLESL
PMNFHAKNLVELSLRDSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDLSSVPNLEILTL
EGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLPSSI
THLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLEGGHFSSIPPTINQLSRLKALNLSH
CNNLEQIPELPSGLINLDVHHCTSLENLSSPSNLLWSSLFKCFKSKIQARDFRRPVRTFI
AERNGIPEWICHQKSGFKITMKLPWSWYENDDFLGFVLCSLYVPLEIETTPHRDFNCKLN
FDDDSAYFSCHSHQFCEFCYDEDASSQGCLIYYPKSNIPEGYHSNEWRTLNASFNVYFGV
KPVKVARCGFHFLYAHDYEQNNLTIVQRRSCDTSSAVEDTNTDVERSCDGTTLNIDGNGV
DAQDHEMDHMHRWLELLCKFVHWICCTRH
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccagcacccatagagcctcttcttcgactacttctatttctcgtaattat
gatgtgttcttgagttttagaggtggcgatactcgcagaaatttcactgatcatctatat
accacattgactgcatctggaattcaaactttcagagatgatgaagaacttgagaaagga
ggagatattgcatctgatctcttgagagctatagaagaatcgaggttttttattattgtt
ttctcaaaaaattatgcttactccagatggtgtttaaatgaactcgtaaagatcattgaa
cgcaagagccaaaaggaatcagtggttctaccaatcttctaccatgtggatccatctgat
gtacgaaaccaaaggggaagtttcggagaagcacttgcctaccatgaaagagatgcaaat
caagaaaagaaggagatggtacaaaagtggaggattgccttgacaaaagcagcttatcta
tccggatgccatgtggatgaccagtatgagactgaggttgtcaaggaaattgttaataca
atcattagaagattaaaccgtcaacctttaagtgtgggaaagaacatagttggaattagt
gttcatttggaaaaattgaaatcgttgatgaacaccgagttaaatgaggttagagtcata
gggatatgtggaactggtggggttggtaagactactatcgccaaggctatttataatgag
atctcatgtcaatatgatggtagtagctttctgagaaatatgagagagagatccaaaggt
gatatacttcaattacagcaggaacttcttcatggtatcctaaggggaaaattttttaag
ataaacactgttgatgaaggaattagtatgataaagaggtgtctaagctccaatagagtt
cttattatttttgatgatgttgatgagttgaaacaactagaatatttggctgaagagaag
gattggtttcaggcaaaaagtacaatcatcattacatctagagacaaacatgtgcttgct
cgatatggagtggatataccatatgaggtttcaaaattaaacaaggaagaagctattgag
ctctttagtttgtgggcctttaaacaaaatcatcccaaagaagtttataaaaacctctca
tacaatatcatagattatgctaatggccttccgttagcacttaaagttttgggtgcttct
ctttttggaaagaaaataagtgaatgggaaagtgcaatgtgtaagctaaaaataataccc
cacatggaaattcacaatgtacttagaataagttttgatggactcgatgacgtagacaaa
gggatatttttggatgttgcatgctttttcaaaggagatgacaaatattttgtttcaaga
atattgggccctcatgcaaagcacggaataacaactctagctgatagatgtctcataact
gtttcaaaaaacaggctagatatgcatgatttaatacaacaaatgggttgggagattatt
cgtcaagaatgtcctaaagaccctggaagaaggagtagattgtgggattctaatgcctat
catgtgcttataagaaatatggggacacaagcaattgaaggactattcctagatagatgt
aaatttaatccatcacaacttaccatggaatctttcaaagagatgaataaacttagattg
ctcaaaatccataacccgcgtagaaagctatttcttgaaaaccaccttccaagggacttt
gaattctctgcttatgagttaagatatctgcattgggatggataccctttagaatctttg
ccaatgaattttcatgcaaagaaccttgttgaactctcattaagggacagcaatataaag
caagtttggagggggaataagcttcatgacaagttgagggttattgatctcagtcactct
gtccatctcataagaattccagacttatcaagtgtgccaaacttggagattctaactcta
gaagggtgtgtaaacctggagcttcttccaagaggcatttacaagttgaaacaccttcaa
actttgtcttgcaatggctgttcaaagctagagagatttccagaaatcatggccaatatg
agaaagctaagggtgcttgatttgagtggaacagctataatggacttaccgtcatcaatt
acacatctaaatggtcttcaaactctcctacttcaagagtgttcaaagctccaccaaatc
cctagtcatatttgctatttatcatcattaaagaaactaaatctggaagggggccatttt
agtagcatacctcctaccatcaatcagctttccaggctgaaagcccttaaccttagtcac
tgcaacaatcttgaacaaattccagagcttccatcaggtttaattaatctagatgtccat
cactgcacatccctggaaaatttatccagtccatcaaatctactctggtcttctttattc
aaatgttttaaatccaaaattcaggcgcgtgactttagaagacctgtcagaacttttatt
gctgaaagaaatgggattccggagtggatatgccatcagaaaagcgggttcaaaataaca
atgaaacttccctggagttggtatgaaaatgatgacttcttgggctttgttctgtgctct
ctttatgttccacttgagattgagaccacaccacatagggatttcaactgtaaattgaat
ttcgatgatgacagtgcatatttttcctgtcactctcatcaattttgtgaattctgctat
gatgaagatgcatcaagtcaagggtgcttgatatattatcctaagtcaaatattcccgag
ggatatcactcaaatgaatggagaaccttgaacgcttcatttaatgtctactttggtgtt
aaaccagtgaaagtggcgaggtgtggcttccactttctatatgcccacgattatgaacag
aacaatctcacaattgtacaacgtagaagctgtgacaccagttcagcagtagaagatact
aatactgatgtggagagaagctgtgatggcaccaccctgaatattgatggtaatggtgtt
gatgcccaagaccatgaaatggaccatatgcatagatggctggagcttctttgcaaattt
gttcattggatatgctgtacaagacactaa
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integrated database retrieval system
