KEGG   Vitis vinifera (wine grape): 100254854
Entry
100254854         CDS       T01084                                 
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
  KO
K08740  DNA mismatch repair protein MSH4
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vvi03036]
    100254854
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    100254854
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV
Other DBs
NCBI-GeneID: 100254854
NCBI-ProteinID: XP_059589775
LinkDB
Position
2:join(5602929..5602994,5606882..5607085,5607202..5607237,5607361..5607473,5609871..5609916,5610574..5610620,5610845..5610952,5611185..5611260,5612970..5613042,5613173..5613318,5613404..5613489,5615704..5615843,5615934..5616073,5616167..5616217,5618973..5619036,5620971..5621114,5621203..5621270,5621398..5621456,5622182..5622338,5624456..5624508,5624698..5624796,5626208..5626322,5626406..5626528,5627016..5627180)
AA seq 792 aa
MEDDGGERSSFVIGLIENRAKEVGVAAFDLRLASLHLSQYIETSSSYQNTKTLLHFYDPM
VIIVSPNKLAPDGMVGVSELVDRFYFAVKKVVMARSCFDDTKGAVLIKNLAAKEPSALGL
DTYYKQYYLCLAAAAATIKWTEAEKGVIITNHSLLVTFNGSFDHMNIDATSVQNLEIIEP
LHSSLWGTSNKKRSLFHMLKTTKTTGGTRLLRANLLQPLKDIETINARLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTKEVLGVEYARKNQMLISSIILLKTALDAL
PLLSKVLKDAKSFLLANVYKSVCANETYASIRKRIGEVIDEDVLHARVPFVARTQQCFAV
KAGIDGLLDIARRSFCDTSEAIHNLANKYREDFKLPNLKLPFNNRQGFYFSIPQKDIQGK
LPSKFIQVLRHGNNIHCSTLELASLNVRNKSAAGECYTRTEVCLEALIDAIREDVSVLTL
LAEVLCLLDMIVNSFAHTISTKPVDRYTRPEFTDNGPLAIDAGRHPILESIHNDFVPNNI
FLSEGSNMVIVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFSTLRVVDRIFTRMGTVD
NLESNSSTFMTEMKEMAFIMQNVSQRSLIVMDELGRATSSSDGYAIAWSCCEHLLSFNAY
TIFATHMENLSELATIYPNVKILHFDVDIKNSRLDFKFQLKDGPRHVPHYGLLLAGVAGL
PSSVIKTAISITSRITEKEVKRMEVNCQQYHPIQMAYRLAQRLICLKYSSQDEDSVRHAL
QNLKESYIDGRL
NT seq 2379 nt   +upstreamnt  +downstreamnt
atggaggacgatggaggagagagatcaagctttgtgatcggtctcatcgaaaacagagca
aaggaggttggagtggctgcttttgatttaaggttggcttcactgcatctttctcagtat
atcgaaaccagcagctcatatcagaatacgaagacattgctgcacttttacgatcccatg
gtgattattgtttctccaaataagctagcacctgatggcatggttggagtctcagaactg
gtggatagattttactttgcagtcaagaaggttgtaatggccaggagttgctttgatgat
accaagggagctgtgctgattaaaaacttggcagccaaggagccatctgcacttggtttg
gatacttactacaagcagtattatctctgtttggctgctgctgcagctactattaagtgg
acagaagcagagaaaggggtcattattacaaaccactcacttttggttacttttaatgga
tcatttgaccacatgaatattgatgctactagtgtccaaaatttagaaattatcgagcca
ctgcattcatctctttggggcacaagcaataaaaagagaagtcttttccacatgcttaag
acaacaaaaactactggagggactcgacttctccgagccaatcttttgcagcctttaaag
gacattgaaactatcaatgctcgtcttgattgcctggatgaactgatgagcaatgagcaa
ctgttctttggactctctcaggttcttcgtaagtttccaaaagaaactgatagggtactt
tgtcatttctgcttcaagccgaagaaggttacaaaagaagtcttgggtgttgaatatgct
agaaagaaccaaatgttgatatcaagcattattcttcttaaaactgccttagatgccttg
cctttactctcaaaggtgcttaaggatgcaaaaagttttcttcttgcaaatgtttacaag
tctgtgtgtgcaaatgaaacatatgcttccattagaaagagaattggggaggtgattgat
gaagatgtgcttcatgcacgggttccttttgtagcccgtacacagcagtgttttgctgtc
aaggctggtatagatggacttttggacattgcaaggcgatcattttgtgataccagtgaa
gccatacataaccttgcaaacaagtatcgtgaagacttcaagctgccaaatttgaaactc
ccattcaacaataggcaaggattttattttagcataccacagaaggacattcagggaaag
cttcccagcaagttcattcaggtcttgagacatgggaacaatatacactgctcaactctg
gaacttgcttctctgaatgttaggaataagtctgcagctggagaatgctatacacggaca
gaagtttgcctagaagcactaatagatgctataagggaggatgtatctgtcctcacactg
cttgcagaggtcttgtgccttttagatatgattgttaattcatttgctcatacaatatcc
actaagccagttgatcggtataccagaccagaatttacagataatggcccattggcaatt
gatgctggaagacaccctatccttgaaagcatacacaatgacttcgttcccaacaatatt
tttctttctgaaggatcaaatatggtgattgtcatgggcccaaacatgagtggaaagagt
acttatctccaacaagtgtgccttgtggtcattcttgcccaaatcggttgctatgttcct
gctcgcttctcaactttgagggtcgttgatcgcatatttacaaggatggggacagtggat
aatcttgaatcaaactctagtacgttcatgacagagatgaaagaaatggcttttatcatg
cagaatgtctcccagaggagtctgattgtaatggacgaactagggagggctacttcttct
tctgatggatatgcaattgcttggagttgctgtgagcatttgttatcattcaacgcttat
actatatttgccactcatatggagaacttatcagaattagcaaccatctacccaaatgtg
aaaattcttcacttcgatgttgacataaaaaacagtcgcttagattttaagtttcaactc
aaggatggaccaagacatgtaccacactatggccttctgttagctggagtggcaggttta
ccaagctcagtaattaaaactgccataagcatcacttcaaggatcacagagaaggaagtg
aaaaggatggaagtaaattgccagcagtatcatccaatacagatggcttatcggcttgct
cagcggctcatatgcttgaaatactccagccaggatgaggattcagttcgacatgcatta
caaaatctcaaagagagctacattgatggaaggctctag

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