Vitis vinifera (wine grape): 100255551
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Entry
100255551 CDS
T01084
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100255551
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vvi01002
]
100255551
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vvi04121
]
100255551
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100255551
Peptidases and inhibitors [BR:
vvi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100255551
Ubiquitin system [BR:
vvi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100255551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Ribosomal_L37ae
Motif
Other DBs
NCBI-GeneID:
100255551
NCBI-ProteinID:
XP_059592973
LinkDB
All DBs
Position
5:complement(join(16264906..16265146,16276021..16278890))
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AA seq
1036 aa
AA seq
DB search
MGKKVKKKGRTGHKEKRGSASSLKIVPQQCNPSSETVADGNTVVKGREPCIHFNKGVDLG
KISAKFGLPEPIRCEDCREGTIDRRGNRAKGKHGKKGSGSVDSKSESKAIWVCLECGHFA
CGGVGLPTTPQSHAVRHARLTRHPLVIQFENPHLRWCFPCKMVIPVDKMEANDMLLDIVK
LVKGRSVKGPSVDGEDVWYGGGSVKNEKTPDNNLEIIPDNTLSGDLDERDSYVVRGLINI
GNTCFFNSIMQNLLAMNNLRDYFLKLDGSIGPLTSAFRKVFDETSSGTGLRNVINPKSVF
GCVCAKAPQFRGYQQQDSHELLRCLLDGLCTEELGARKRANSSQEDGISPNEAPTFVDTM
FGGQISSTVCCVECGHSSTVYEPFLDLSLPVPTKKPPSRKTQPVSRPKKTKLPPKKAGRV
RSKVNKDADSLVALSVQHPSSDGDSSNQIQSSAPVAEKLVSSSGDSAGSDLVSPCAVADV
KDSVSKNISTSEEFENKQVFENVTETKAAPSDDFTLLDCSDTFTWLDYLDPGAVLDVHNV
ASQNKDVSVIQDSGNQDNVQNDVLLQNASEFSSQVYPHKGEPNLKIDSCSANSWEEELPV
QIQSSEVLLLPYKEETSTAVEITTGQVGPSVVSGSNEELLDFDGFGGLFDEPEAASGVNL
QPLLGDNSFNANEVVGTGFINRNSSESDPDEVDNSNSMVSIDSCLTYFTKPELLSNEHAW
HCENCSKILWDQRIKTRTNLPNTISKIQMNGSEGKIQNGPFGLCKDISPDEVKDIDNENV
KNDGHNILGGLAPHDRISDDDSKQNGLKLQTSQTVEVNPVVSQCEGGKSKMNYALPELSH
SSDTYKTCSQASLSDPASDSCSVHEPNSVGCNTGKQRNSQMLTGELESEEDEDKEMDSES
VKVKRDATKRILINKAPPILTIHLKRFSQDARGRYNKLNGHVVFKDSIDLRPFMEPRCVE
KGKYEYRLVGVVEHSGSMRMGHYVAYVRGGERRSSGQAKKESGRGVWYYASDASVRETSL
DEVLRCEAYILFYEKI
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaggtcaagaagaaaggccgaactggccacaaggagaagaggggttcggcc
tcttcactgaaaattgttccccaacaatgtaatccaagttctgagactgttgctgatgga
aatacagtggtcaaagggagagaaccatgcatccattttaacaagggtgttgatttgggt
aaaatctcggcaaaatttgggttgccagaacctattcgttgtgaagactgcagggaagga
actattgataggcggggcaatagagctaagggtaaacatgggaaaaaagggagtggttcc
gtggattcaaaatcggagtcaaaagctatttgggtctgtttggaatgtgggcattttgcc
tgtggaggtgttggattgccaacaacccctcagagccatgcagttcgtcatgccaggcta
actcgtcaccccctggtgatccaatttgaaaaccctcatctccgctggtgcttcccatgc
aaaatggtaattccagttgacaaaatggaagcaaatgatatgttattggacattgtgaaa
ttggtaaaggggcgatctgtgaaggggccgtctgtagatggtgaggatgtttggtatgga
ggtggcagtgtcaagaatgaaaaaacaccagataacaaccttgaaataataccagataac
actctttcaggtgatttagatgaaagagattcttacgtagtaagaggcttgatcaacatt
ggcaatacttgcttttttaattcaattatgcaaaatcttctggcaatgaacaatttgcgg
gattacttcttgaagctggatggttctatagggcctcttactagtgcatttaggaaggtc
tttgatgagacaagttcgggcacaggattgagaaacgtaataaatccaaaatctgttttt
gggtgtgtatgtgccaaggctccccagtttaggggatatcagcagcaggacagtcatgaa
ttgctccgttgtttactcgatggattgtgtactgaagagttgggtgccagaaaacgggca
aactcctctcaagaagatgggatttcaccaaatgaggctcctacttttgtggatacaatg
tttgggggccaaatatccagtactgtttgttgtgtggaatgtgggcactcctcaacagtg
tatgagccatttttggatctctcgcttccagttccaacaaagaagcctccatctaggaag
acccaaccagtatctcgccctaagaaaacaaagctgccaccaaagaaagctggaagggtt
cgttcaaaagtaaacaaggatgcagattctctagtggctctaagcgttcaacacccatca
tctgatggtgattcttccaaccaaattcaatctagtgcacctgttgcagaaaaattggtg
tcatcttcaggtgattctgcggggtcagatttagtttccccatgtgccgtggctgatgtc
aaggattcagtttcaaagaatatctctacttcggaagaatttgagaacaagcaagtcttt
gagaatgttactgagaccaaagctgcaccatcagatgattttacattgttggattgctct
gatacttttacatggttggattaccttgatccaggagcagtattggatgttcataatgtg
gcttcacaaaataaagatgtttcagttattcaagattcagggaaccaggataatgttcag
aatgatgtcttattgcaaaatgcctctgaatttagtagtcaggtttatccacacaaggga
gagccaaatctaaaaatagattcttgttctgcaaattcatgggaagaagaactcccagtg
caaattcaaagttctgaagttttgctgcttccctacaaggaagaaacatcaactgctgta
gagatcacaacaggacaagttgggccttcagtagtttcaggctccaatgaagagttattg
gattttgatggttttggtggcttatttgatgagcctgaggcagcttcaggggtaaatttg
caaccattgttaggcgataacagcttcaacgcaaatgaagttgtgggaactggtttcata
aatagaaacagcagcgagtctgatccagatgaagttgataattccaattccatggtgtca
atagatagttgtctgacctattttacaaagccagagcttctctccaatgaacatgcttgg
cattgtgagaattgttcaaaaattttgtgggaccagaggataaaaacaaggaccaacctg
ccaaatactatatctaagattcagatgaatggaagtgagggtaagattcaaaatggccca
tttggtttgtgcaaggacatctctcctgatgaagtcaaagacattgataatgaaaatgta
aaaaatgatggtcataatattctgggtggcttggcaccacatgacaggataagtgatgat
gattcaaagcaaaacggcctaaaactccaaaccagccaaacagttgaggtgaacccagtt
gtttctcaatgtgaaggaggaaaaagcaagatgaactatgctcttccagagctatcacat
tcttcagatacttataaaacctgcagtcaagcaagcttaagtgatccagccagtgattca
tgtagtgttcatgagcctaatagtgttggatgtaacactggtaagcaaagaaattcacag
atgttaactggggagcttgaatcagaagaagatgaggacaaggagatggattctgaaagt
gtaaaagtgaagagggatgcaactaaaaggattctcattaataaggcaccacctattctg
accattcacctgaagaggttcagccaagatgctcgtgggcgctataataaattgaatgga
catgtggttttcaaagattcaattgatcttaggccatttatggaacccaggtgtgtagag
aaaggaaaatatgaatatcggctggttggagtagtggagcattctggaagcatgagaatg
gggcactatgttgcatatgtgagaggaggggagaggaggagcagtgggcaggctaaaaaa
gaaagtggacggggtgtgtggtattatgctagtgatgcttctgtgcgtgaaacttccctg
gatgaagttcttcgatgtgaggcctacatcttgttctatgaaaagatataa
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integrated database retrieval system
