KEGG   Vitis vinifera (wine grape): 100257533
Entry
100257533         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100257533 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100257533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vvi03041]
    100257533
Spliceosome [BR:vvi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100257533
 Complex B
    100257533
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100257533
SSDB
Motif
Pfam: SMN_Tudor Agenet TUDOR SH3_3
Other DBs
NCBI-GeneID: 100257533
NCBI-ProteinID: XP_002269518
LinkDB
Position
12:complement(join(24016453..24016614,24017481..24017609,24018162..24018344,24020919..24020994,24021097..24021179,24027781..24027909,24029319..24029387,24031660..24031734))
AA seq 301 aa
MQGGEELSIDELASNLSTYKDQLQQVRKLLVDDPGNSEYVDMEKELEEVIVLTEELLATA
KQSEISLPAFGTNADASPIQHQSGGSSEHLMEPGNNSDHYGKFPIGTKVQAVWSEDGEWY
EATIDSLTPDGYYVSYDGWGNKEEVDPGNVRPIQEEVNALLEAEKEAEATKQAIKRKIAQ
AAATDFQSRSLPAKLRIEPDDPEDVKIAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQFQ
TTKGRAKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGGSADTD
D
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcaaggcggagaagagctaagcatcgatgaactcgcctccaatctctccacttacaag
gatcagcttcaacaggtcagaaagcttttggttgatgacccagggaactctgaatatgtg
gacatggaaaaggagcttgaagaggtgattgtgttaacggaagaactcttggcaactgca
aagcaaagtgagatatctctaccagcatttgggacaaatgctgatgcatctcccattcaa
caccagtctgggggaagctctgagcatttaatggagccaggaaacaactctgatcattac
ggaaaattccctattggcacaaaagttcaagcagtttggagtgaagatggggaatggtat
gaagcaacaatcgattccttgaccccagatgggtattatgtttcctatgatggatggggg
aataaagaagaggtggatcctggcaatgtaaggccaattcaagaagaagtaaacgctttg
ctggaagcggagaaggaagcagaagctacaaaacaggcaatcaaaaggaagattgcacag
gctgctgccactgacttccaatcacgaagtttaccagcaaagcttcgtatagaacctgat
gatcctgaagatgtgaaaattgctaagcgcaaaaagatacatgcttttaagtcgaagatg
cggtttgagcaacttgaagtcacacagaataagcggcagaatgcttggcagcagttccag
acaaccaaaggaagggctaaaaagattggtttcttttcgggccgcaagcgagaaagcatc
ttcaagtctcctgatgatccaaacggcaaggttggtgtgactggaagcgggaaaggattg
acagagtttcagaagagggaaaagcacttgcatctcaagggaggaagcgctgatactgac
gattaa

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