KEGG   Vitis vinifera (wine grape): 100263567
Entry
100263567         CDS       T01084                                 
Name
(RefSeq) flowering time control protein FY
  KO
K15542  polyadenylation factor subunit 2
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100263567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100263567
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100263567
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A NBCH_WD40 WD40_like WDR54
Other DBs
NCBI-GeneID: 100263567
NCBI-ProteinID: XP_010645644
UniProt: F6I5T1
LinkDB
Position
13:join(23747618..23747915,23748852..23748943,23753560..23753628,23754799..23754903,23755972..23756067,23756328..23756410,23756522..23756593,23756670..23756767,23760210..23760269,23760367..23760427,23760529..23760616,23760736..23760799,23764561..23764639,23765455..23765544,23767662..23767750,23768026..23768561,23772127..23772342,23773936..23774061)
AA seq 773 aa
MMYGDPQQQMQQQQQMQQQQQMHQQQQMHQQQQQIHQQQQMQQQQQGGDFHRGPLPPPPS
QPQPPQSQLPPPPPMMRQPSASSTNLAPEYHHPSAPPYDAHADSFAAKRMRKLAQRRAVD
YTSTVVRYMQIRMWQRDSRDRTVLQPTPAAAIDLLPAVAYSDNPSTSFAAKFVHTSLNKN
RCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNENWMVT
GDDGGSIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQED
RSLSGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQN
GNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEDYFVSGSFDGSIFHWL
VGHETPQVEIPGAHDNSVWDLAWHPIGYILCSGSNDHTTKFWCRNRPGDTVRDKFNMGHN
QGYGDQNPALGGRMPGNFPVPETPTTPGPFAAGLTRNEGTIPGVGVAMPLTIPSLDTSAQ
GEQKQPLPVSIPLGAPPLPPGPHPSLLAANQQQAYQQNPPQMPQHHQALPQQMPPLPLQP
PNMSQLQPPSHLPLLPHPHLPRPPQLPPMGMPSNIPSSMPGSLPMPSMPTSLPLQMPAPM
GMQGAMNQMGPPMPQGHFMGMNPMHAGSLPTGGVPPPIGSFQGGAQMYAPGGSFNRAPAG
QMPMMPGLNPYQTGNPNPSGSGMGTLPSNMGHPSGMAPPPPPPGPPPHGQPTQ
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgatgtacggtgatcctcaacagcagatgcagcagcagcagcagatgcagcagcagcag
cagatgcatcagcaacagcagatgcatcagcagcaacagcagatacaccagcaacagcag
atgcagcagcagcagcaaggcggagactttcacaggggcccactgcccccaccaccgtct
caaccacaaccaccgcaatcgcaactgccacctcctccgccgatgatgcgccagccctcg
gcttcttccaccaatctcgcccccgagtatcaccatccatccgctcctccttatgacgct
catgccgatagttttgctgcaaaaagaatgagaaagctggcccaaagaagagcagttgat
tatactagcactgttgtacgatacatgcagattcgcatgtggcaacgagattcaagggac
aggacagtattgcaacctaccccagctgcagcaattgatttgttgccagcagttgcttat
tcagataatccatccacaagttttgctgcaaagtttgttcatacatctttaaacaaaaat
cgttgttcaattaatcgagttctgtggactcctactgggagacgtcttatcacaggctcg
caaagtggggaatttactctttggaacggacagtcatttaattttgaaatgattcttcag
gctcatgatcaagcaatcaggtctatggtatggagtcataatgagaactggatggttact
ggtgatgatgggggctcaataaagtattggcaaaacaacatgaataatgtaaaggcgaat
aaatctgctcataaagaatcagttcgtgacttaagcttctgtcggacagatttaaagttc
tgttcctgctctgatgatactactgttaaagtttgggactttgctcggtgccaggaggac
cgttcactatctggccatggttgggatgtgaagagtgttgattggcaccctacaaagtcc
ttgctagtttcaggtgggaaagacaaccttgtgaaactttgggatgctaaaacaggaaga
gagctttgttcatttcatggccataaaaacactgtgctctgtgtcaaatggaatcaaaat
ggtaactgggtgctaactgcttcaaaagatcaaatcatcaagctttatgacataagggct
atgaaggagcttgaatccttccgtgggcatcggaaggatgtgactgcattggcttggcat
ccatttcatgaagactattttgtaagtggaagttttgatggatccattttccattggcta
gtcgggcatgaaaccccccaggttgaaattcctggtgcccacgataatagtgtttgggac
cttgcctggcatcctatagggtatattctttgcagtggaagcaatgatcatacaacgaaa
ttttggtgtagaaataggccaggagataccgttcgtgataaattcaacatggggcacaac
caaggttatggtgatcaaaaccctgcacttggtggtcgcatgcctggtaatttcccggta
cctgaaaccccaacaactccgggtccatttgcagctggattgacccgaaacgagggaacc
attccaggtgttggagttgcaatgccattaactatcccatctcttgatacatcagctcaa
ggagagcagaagcagcctcttcctgtttcaattcctttaggggcacctcctcttccgcct
ggtcctcacccatcccttcttgcggccaaccagcagcaggcatatcaacaaaatcctcct
caaatgccacaacaccaccaggcactcccacagcaaatgccgcctttgcctctgcagcca
ccaaatatgtcacagctacagcctccttcccatttacccctgctaccacatcctcactta
cctcgccctccccagttgcccccaatgggcatgccttcaaatattccgtcttctatgcca
ggatccttgcccatgccttcaatgcccacatcacttccactgcagatgcctgctccaatg
gggatgcaaggtgcaatgaatcagatgggtcccccaatgccgcaaggccattttatgggc
atgaatccaatgcatgcaggatccttacccactggtggtgtacctcctcccattggaagt
ttccagggtggggctcaaatgtatgcaccaggtggttcattcaaccgagctccagctgga
caaatgccaatgatgcccgggctgaatccctaccagaccgggaatccgaatccaagcgga
agcggcatgggaacactgccatcaaatatgggtcatccatctggtatggctccgccacca
ccaccaccaggtccgccgccgcatggccaaccaacacaatag

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