KEGG   Vitis vinifera (wine grape): 100264578
Entry
100264578         CDS       T01084                                 
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100264578
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vvi01002]
    100264578
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100264578
   04121 Ubiquitin system [BR:vvi04121]
    100264578
Enzymes [BR:vvi01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100264578
Peptidases and inhibitors [BR:vvi01002]
 Metallo peptidases
  Family M67
   100264578
Membrane trafficking [BR:vvi04131]
 Endosome - Lysosome transport
  Others
   Others
    100264578
Ubiquitin system [BR:vvi04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    100264578
SSDB
Motif
Pfam: JAB USP8_dimer Prok-JAB NSUN5_N
Other DBs
NCBI-GeneID: 100264578
NCBI-ProteinID: XP_002278560
UniProt: D7SJ09
LinkDB
Position
17:complement(join(3777664..3777838,3777935..3777987,3778074..3778136,3779427..3779501,3779602..3779664,3779747..3779836,3779980..3780307,3780573..3780619,3780690..3780795,3793809..3793903,3796189..3796359,3796455..3796530,3796767..3796831,3804041..3804154))
AA seq 506 aa
MRPSSGGINIAASAQKLDVDNRISLRYYYRIADNILKQADIFREEKNIIDLYIMLLRFSS
LTSETIPCHRDYKASLQSKKNYLKKNLLRALCELEELKPAVRQKIDELNQKHTYQVNRWG
ADSSLEWPHVRKQTLTKHEMTKTPRPTARDFEYQGSKIQQFSRAKPVEEQFRRLSVGILR
PREETLSRHSILGPNGLHGQWQPPTIDKRVQYPSNLDLTPVQFPSLQHHVEDGLMNNNEA
SSSEHEQSSLESVLTLNEDNQIHPAEELGSLISFETTETPHTEIIRQPSPPPVLADVQDL
IPETPTQVSEVNGQMETPSTDGLVCSEAPLEMHISTVLMESFLKLAKSNTVRNLETCGIL
AGSLKNRKFYVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLGWIHTHPTQSCFMS
SVDLHTHYSYQTMLPEAIAIVMAPKDASKKHGIFRLTTPGGMSVIRHCDQRGFHPHHSPS
DGGPIYKSCTDVYMNPNIHFDVIDLR
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgcggccttcttcgggaggaatcaacatcgccgccagtgctcagaaactcgatgtcgat
aatcggatttccctccgttactactaccgtatcgctgataatatcctcaaacaggctgac
atatttcgagaagagaagaacattatagatctctatattatgcttctaaggttttcaagt
ttaacttctgagactataccatgccatcgtgattataaggcatctctacaaagcaaaaag
aattatttgaagaagaacttattgagagccctgtgtgagttggaggaattgaagccagct
gtgcgacagaagattgatgaattgaaccagaaacatacatatcaagtaaacagatggggt
gctgattcctcactggaatggcctcatgttaggaaacaaactttgacgaaacatgagatg
acaaagacaccacgacccactgctcgagattttgaatatcaaggttcaaagattcagcag
ttctcgcgagccaagccagtggaagagcaattccgcagactatctgttggtatcctgcgc
ccaagggaggaaactctatccagacactctattttgggtccaaatggacttcatgggcag
tggcagccacctaccattgataaaagggtccaatatccaagcaatttagatttgactcca
gttcaatttccaagtctgcagcatcatgtggaggatggacttatgaataacaatgaagct
agcagctcagaacatgagcaatctagtttggaatcagtccttacactgaacgaggataat
cagattcatcctgctgaggaactgggttccttgatttcttttgaaaccacagaaactcct
catacagagattatcagacagccttctcctccacctgttctggcagacgtacaagatttg
atcccagagactcccacccaagttagtgaggtaaatggccaaatggagaccccatcaacg
gatgggttagtttgttctgaagctcccctcgaaatgcacatttcaactgtattgatggaa
agcttcttgaagcttgctaagtcgaacactgtcaggaatttggaaacttgtggtatcctt
gcaggttcacttaagaacagaaaattttatgtcacagctctcattattccgaagcaggag
tcaacatcagattcatgtcagaccacaaatgaagaggaaatttttgaagtgcaggataag
caatccctcttccctcttgggtggatacatactcatcctacccagtcgtgtttcatgtct
tctgttgatcttcatacccattactcatatcagactatgctaccggaagccatagcaatt
gtcatggcaccaaaggatgcttcaaaaaagcatggcattttccgcctgacaactccaggt
ggcatgtcagtcataagacactgcgaccaacgtggctttcatccacatcattctccttcg
gatggtgggcccatctacaaaagctgtacagatgtttatatgaatcccaatatacatttt
gatgtcattgatcttcggtga

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