Vulpes vulpes (red fox): 112917855 Help Entry 112917855         CDS       T05911                                  Symbol COL1A1 Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism vvp  Vulpes vulpes (red fox) Pathway vvp04151   PI3K-Akt signaling pathway vvp04510   Focal adhesion vvp04512   ECM-receptor interaction vvp04611   Platelet activation vvp04820   Cytoskeleton in muscle cells vvp04926   Relaxin signaling pathway vvp04933   AGE-RAGE signaling pathway in diabetic complications vvp04974   Protein digestion and absorption vvp05146   Amoebiasis vvp05165   Human papillomavirus infection vvp05205   Proteoglycans in cancer vvp05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:vvp00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     112917855 (COL1A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     112917855 (COL1A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     112917855 (COL1A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     112917855 (COL1A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     112917855 (COL1A1)   09152 Endocrine system    04926 Relaxin signaling pathway     112917855 (COL1A1)   09154 Digestive system    04974 Protein digestion and absorption     112917855 (COL1A1)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     112917855 (COL1A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     112917855 (COL1A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     112917855 (COL1A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     112917855 (COL1A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     112917855 (COL1A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:vvp00536]     112917855 (COL1A1) Glycosaminoglycan binding proteins [BR:vvp00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    112917855 (COL1A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC IL8 Motif Other DBs NCBI-GeneID:  112917855 NCBI-ProteinID:  XP_025851655 UniProt:  A0A3Q7T9F4 LinkDB All DBs Position Unknown AA seq 1457 aa AA seqDB search MFSFVDLRLLLLLAATALLTHGQEEGQEEDIPPVTCVQNGLRYYDRDVWKPEACRICVCD NGNVLCDDVICDETKNCPGAQVPXAPSATPGSPSPTDQETTGVEGPKGDTGPRGPRGPAG PPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGGISVPGPMGPSGPR GLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPP GPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLP GERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSEGPQ GVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPP GPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGPPGER GGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSP GPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAV GPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDL GAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQ GMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPS GPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPT GPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGK GPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQR GERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPGRD GSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGARGPA GPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSA GSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPPQE KAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHS DWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPQVAQKNWYISKNPKEKRHVWYG ESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLKKA LLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAPLDV GAPDQEFGMDIGPVCFL NT seq 4374 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg cacggccaagaggagggccaagaagaagacatcccaccagtcacctgcgtacagaacggc ctcaggtactatgaccgagacgtatggaaacccgaggcctgccggatctgtgtctgcgac aacggcaacgtgttgtgcgatgacgtgatctgcgacgaaaccaagaactgccccggcgcc caagtccccngcgcgcccagtgcgacccccggctcaccgtcacctaccgaccaagaaacc acaggagtcgagggacccaaaggagacactggcccccgaggtccgaggggacctgccggc ccccctggccgagatggcatccccggacagcctggacttcccggaccccctggacctccc ggaccccctggaccccctggcctcggaggaaactttgctccccaaatgtcttatggctat gatgagaaatcaactggaggaatctccgtgcctggccccatgggtccttctggtcctcgt ggtctccctggcccccctggcgcacctggtcctcaaggtttccaaggcccccctggtgaa cctggcgagcctggagcctcaggtcccatgggtccccgtggtccccctggcccccctggc aagaacggagatgatggtgaagctggaaagcctggtcgtcctggtgagcgtgggcctcct ggacctcagggtgctcggggattgcctggaacagctggccttcctggaatgaagggacac agaggtttcagtggtttggatggtgccaagggagatgctggtcctgctggtcccaagggt gagcccggtagccccggtgaaaatggagctcctggccagatgggcccccgtggtctgcct ggtgaaagaggtcgccctggagcccctggccctgccggtgctcgtggaaacgatggtgct actggtgctgctgggccccctggtcccactggccccgctggtcctcctggcttccccggt gctgttggtgctaagggtgaagctggtccccaaggagcccgtggctctgaaggtcctcag ggcgtgcgtggtgagcccggcccccctggccctgctggtgctgccggccctgccggaaac cccggtgctgatggacagcctggtgctaaaggtgctaacggcgctcctggcattgctggt gctcccggcttccccggtgcccgaggcccctctggaccccagggccccagcggtcctcct ggtcccaagggtaacagcggtgaacctggtgctcccggaaacaaaggagacactggtgcc aagggagagcccggccccactggtattcaaggtccccctggccctgctggggaagaagga aagcgaggagcccgaggtgaacctggacccactggcctgcccggaccccctggcgagcgt ggtggacctggtagccgtggtttccctggtgcagatggtgtcgctggtcccaagggtccc gctggtgaacgtggttctcctggtcccgctgggcccaaaggttctcctggtgaagctggt cgccctggtgaagctggtctgcctggtgccaagggtctgactggaagtcctggcagccct ggtccagatggcaaaactggcccccctggtcccgctggtcaggatggtcgccccggaccc ccaggcccccctggtgcccgtggtcaagctggtgtgatgggattccctgggcctaaaggt gccgctggagagcctggcaaggctggagagcgtggtgtccctggcccccctggtgctgtt ggtcctgctggcaaagatggagaagcaggagctcaggggccccctggccctgctggcccc gctggcgagagaggtgaacaaggtcctgctggctcccccggattccagggtctccctgga cctgctggtcctcccggcgaagctggcaaacccggtgaacagggtgttcctggcgacctt ggtgcccccggcccctctggagcaagaggcgagagaggcttccctggtgaacgtggtgtg caaggtccccccggtcctgcaggtccccgaggagccaacggtgcccctggcaatgatggt gctaagggtgatgctggtgcccctggagcccccggtagccagggcgctcctggccttcag ggaatgcctggtgaacgaggtgcagctggtcttcctggccctaagggtgacagaggtgat gccggtcccaaaggtgctgatggctctcctggcaaagatggtgtccgtggtctgactggc cccattggtcctcctggccctgctggtgcccctggtgacaagggtgaagctggtcctagc ggccctgctggtcccactggagctcgtggtgcccccggagaccgtggtgagcctggtccc cctggtcctgctggcttcgctgggccccccggtgctgatggccaacctggtgctaaaggt gaacccggtgatgctggtgctaaaggcgacgctggtccccctggccctgctggacccact ggaccccccggccccattggtaacgttggtgctcctggacccaaaggtgctcgtggcagc gccggtccccctggtgctactggtttccctggtgctgctggccgcgtcggtccccccggc ccctctggaaatgctggaccccctggccctcctggccctgctggcaaagaaggcggcaaa ggcccccgtggtgagactggccctgctggacgtcccggtgaagttggtccccctggtccc cccggccctgctggcgagaaaggatcccctggtgctgatggacccgctggtgctcccggc actcccggacctcaaggcattgctggacagcgtggtgtggtcggtctgcccggtcaacga ggagaaagaggcttccctggtcttcccggcccctctggcgaacctggcaaacaaggtcct tctggagcaagtggtgaacgtggtccccctggtcccatgggcccccctggattagctgga ccccctggcgagtctggacgggagggatctcctggtgctgaaggctcccctggacgagat ggttctcctggccccaagggtgaccgtggtgagaccggccctgctggaccccctggtgcc cccggtgcccctggtgctcctggccccgtcggccctgccggcaagaacggtgaccgcggt gagactggtcctgctggtcctgctggcccaatcggccctgttggtgctcgtggtcctgct ggaccccaaggcccccgtggtgacaagggtgagacaggcgaacagggtgacagaggcata aagggtcaccgtggcttctctggtcttcagggtcctcctggccctcccggctctcctggt gaacaaggtccttctggagcttctggtcctgctggcccccgaggtccccctggctctgct ggttctcctggcaaagacggactcaacggtctcccaggccccattggcccccccggtcct cgtggtcgcactggtgatgccggtcctgttggtccccccggccctcctggaccccctggt ccccccggtcctcccagcggcggtttcgacttcagcttcctgccccagccacctcaggag aaggctcacgatggcggccgctactaccgggccgatgatgccaacgtggtccgtgaccgt gacctcgaggtagacaccaccctcaagagcctgagccagcagatcgagaacatccggagc cctgaaggaagccgcaagaaccctgcccgcacctgccgcgacctcaagatgtgccactcc gactggaagagcggagaatactggattgaccccaaccaaggatgcaacctggatgccatc aaggttttctgcaatatggagacaggtgagacctgcgtataccccactcagccccaggtg gcccagaagaactggtacatcagcaagaaccccaaggagaagagacacgtctggtacggc gagagcatgaccgatggattccagttcgagtatggtggtcagggctccgatcctgccgat gtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccagaacatcacc taccactgcaagaacagcgtggcctacatggaccagcagaccggcaacctcaagaaggct ctgctcctccagggttccaacgagatcgagatccgggccgagggcaacagccgcttcacc tacagtgtcacctacgacggctgcacgagtcacactggagcctggggcaagacagtgatc gaatacaaaaccaccaagacctcccgtttgcccatcatcgatgtggcaccattggacgtt ggcgccccagaccaggaattcggcatggatattggccctgtctgcttcctgtaa

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