Vulpes vulpes (red fox): 112932949
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Entry
112932949 CDS
T05911
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
vvp
Vulpes vulpes (red fox)
Pathway
vvp04120
Ubiquitin mediated proteolysis
vvp04137
Mitophagy - animal
vvp04141
Protein processing in endoplasmic reticulum
vvp05012
Parkinson disease
vvp05014
Amyotrophic lateral sclerosis
vvp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112932949 (PRKN)
04120 Ubiquitin mediated proteolysis
112932949 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112932949 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
112932949 (PRKN)
05014 Amyotrophic lateral sclerosis
112932949 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
112932949 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvp04131
]
112932949 (PRKN)
04121 Ubiquitin system [BR:
vvp04121
]
112932949 (PRKN)
03029 Mitochondrial biogenesis [BR:
vvp03029
]
112932949 (PRKN)
Enzymes [BR:
vvp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
112932949 (PRKN)
Membrane trafficking [BR:
vvp04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
112932949 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
112932949 (PRKN)
Xenophagy
Other xenophagy associated proteins
112932949 (PRKN)
Ubiquitin system [BR:
vvp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
112932949 (PRKN)
Mitochondrial biogenesis [BR:
vvp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
112932949 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR
Rad60-SLD
Rad60-SLD_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
112932949
NCBI-ProteinID:
XP_025871734
UniProt:
A0A3Q7T449
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDSETSIFQLKEVVAKRQGAPVDQLRVIFAGKELRNDLTVQSCD
LDQQSIIHVVLRPWSKGQEREGPGGDGPRKAVEGSDREPESLTRVDLSSSVLPAHSVGLA
VILSDNSERVLPDRRPAGRRTYNSFYVYCKGPCQRIQPGKLRVQCSTCQQATLTLAQGPS
CWDDVLIPNRMTGECHSANCPGTTAEFFFKCRAHPTSDKETSVALNLITTNSRDITCITC
TDIRSPVLVFQCNHRHVICLDCFYLYCVTRLNDRQFIYDPQLGYSLPCVAGCPNSLIKEL
HHFRILGEEQYNRYQQYGAEECVLQMGGVLCPSPGCGAGLLPEPGVRKVTCEGSNNLGCG
FIFCRECKEEYHEGECNTLFEASGAVTQAYKVDEKAAEQARWEEASKETIKKTTKPCPRC
HVPVEKNGGCMHMKCPQPQCQLEWCWTCSCEWNRTCMGDHWFDV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgttcgtcaggttcaactccagccatggtttcccagtggaggtcgattctgaa
accagcatcttccagctcaaggaggtggttgctaagcgacagggggccccggttgaccag
ttgcgtgtgattttcgctgggaaggagcttaggaatgacttgacagtgcagagctgtgac
ctggatcagcagagcatcattcacgttgtgctgagaccctggagcaaaggccaagaaagg
gagggccctggaggagatggcccacggaaggctgtggagggctcagacagagagcctgag
agcttaacgcgtgtggacctcagcagctctgtcctcccagcccactcggtgggtctagct
gtgatcctgagcgacaactctgagagggttctgccagacagaaggccagctggtagacga
acctacaacagcttttatgtttactgcaaaggcccctgtcaaagaatacagccaggaaaa
ctgagggtgcagtgcagcacctgccagcaggcaacactcaccttggcccagggtccatct
tgctgggacgatgtcctaatcccaaaccggatgactggtgaatgccattcggcaaactgc
cctgggactacagccgagtttttcttcaaatgtagagcacacccaacctctgacaaggaa
acgtccgtagctttgaacctgatcacaacgaacagtcgagacatcacctgcataacgtgc
accgacatcaggagccctgtcctggtttttcagtgcaaccaccgccatgtgatttgctta
gactgtttctacttgtactgtgtgacaagactaaatgacagacagtttatctatgaccct
cagcttggctactctctgccttgtgtggctggctgccccaactccttgattaaagagctc
catcacttcaggattcttggagaagagcagtacaaccgataccagcaatatggcgctgaa
gagtgtgtgttacagatggggggcgtgttgtgccccagccctggttgtggagctggactg
cttcccgagccaggcgtgaggaaggtcacttgtgaagggagtaataatcttggctgtggg
ttcatcttttgccgggaatgtaaggaagagtaccatgaaggcgaatgcaacaccctattt
gaagcctcaggagcagtgactcaggcctacaaagttgatgagaaggcagcagagcaagct
cggtgggaagaggcctccaaagagacaatcaagaaaaccaccaagccctgtccccgttgc
catgtgcccgttgaaaaaaatggaggatgcatgcacatgaagtgcccacagccccagtgc
cagctggagtggtgctggacctgcagctgtgagtggaaccggacctgcatgggggaccac
tggttcgacgtgtag
DBGET
integrated database retrieval system
