Weissella tructae WS08: WS08_0502
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Entry
WS08_0502 CDS
T03228
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
wce
Weissella tructae WS08
Pathway
wce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
wce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WS08_0502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wce03400
]
WS08_0502
Enzymes [BR:
wce01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
WS08_0502
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WS08_0502
DNA repair and recombination proteins [BR:
wce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WS08_0502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AIG65441
UniProt:
A0A075TYR2
LinkDB
All DBs
Position
577779..578615
Genome browser
AA seq
278 aa
AA seq
DB search
MPELPEVETVRRGLNRLVKGQTIESVEVRWDKTISNMTPEEFDAEIAGRTIEVVERRGKY
LLFRLSGKKTLVSHLRMEGAYYTMPAGTEPGKHDLVTFKLTDDIDLFYRDTRKFGRMALV
NDTDVMSVAGLAKIGPEPTEEALDLEYMVTIFGKSRTAIKPFLLDQSKIAGIGNIYADEV
LWQTMIHPLTKTNDVTPTELAELRLNIINEMARSIAHHGTTVHSFTDAFGEAGEFQNELD
VYGRHGEPCLRCGTELVKIKVAQRGTTFCPKCQIQKEP
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttccagaagtggaaacggtccgtcgcggactaaaccgcctagttaaaggt
caaacaattgaatcagtcgaggttcgatgggataagaccatctcgaatatgacaccagaa
gaatttgatgcagaaatcgcaggacgtacgattgaagtggtagagcgtcgtggaaagtac
ttgttattcagattatctggtaagaaaacattggtttctcatctaagaatggaaggtgcg
tactatacgatgcctgcaggaactgaacctggtaagcatgatttagttactttcaagtta
acagatgatattgatttattctatcgagatactcgtaaatttggtcgtatggctttagtg
aatgatacagatgtgatgtctgtagcaggattagctaagattggtcctgagccaaccgaa
gaggcgttagatttagaatacatggtaaccatttttggtaaatcaagaaccgccattaag
ccatttttattagatcaaagtaaaattgcgggtattggtaacatctatgccgatgaagtt
ttatggcaaacgatgatacatccgctgactaaaactaatgacgttacaccaacggaacta
gccgaacttcgtcttaatattattaacgaaatggctcgttcaattgctcaccatggaaca
accgttcacagctttacagacgccttcggagaagctggtgaattccaaaatgaactggat
gtttatggacgtcacggtgaaccttgtttacgctgtggtaccgaattagtcaaaattaaa
gtcgcgcaacgtggaacaacattctgtcccaagtgtcaaattcaaaaggagccataa
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