Wallemia ichthyophaga: J056_001279
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Entry
J056_001279 CDS
T03457
Name
(RefSeq) Protein sof1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
wic
Wallemia ichthyophaga
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wic03009
]
J056_001279
04121 Ubiquitin system [BR:
wic04121
]
J056_001279
Ribosome biogenesis [BR:
wic03009
]
Eukaryotic type
90S particles
Other 90S particles
J056_001279
Ubiquitin system [BR:
wic04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
J056_001279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Sof1
ANAPC4_WD40
eIF2A
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
20374231
NCBI-ProteinID:
XP_009269114
UniProt:
R9AD69
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MDRMFAKPFIGSIECGDGVYGMARDSSRLGVVATSGALGEVAVHDIPTRQPLLNIPNAHH
GIVSSLTFSHTAKSNRGDSRLLSAGVDKSVKMWDANYSTDAGDNAGFIDEDVAEKHSQKP
LRVWSANAGINSITHNRLHPTFATASNAIQLWEEARTEPIETYKWGHDNISALKFSPTEH
SIMAAAGSDRSVSLWDTRVNGGSIGRIMTPFKMNDLSFNPILPTLLLTAGEDHNLYTWDI
RNLGNGALQIYKDHVAAVTTCDWSPTGQQIASGGWDRTVRVFDKNHGRSSDCYHTKRMQR
LMNVQFSLDSKYILTGSDDGNLRMWKSRASDKIGQIDGRERDKMNYRDSLRQRWGGVGEV
RKVERRRNTPKAIRNASSAKKTMVDAQRAKEENIRTHTKAGQAKPKSEKKRAVVSEQT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggatagaatgttcgccaaaccttttatcggttcaattgagtgcggtgatggtgtttac
ggcatggctagggatagctctaggttgggcgttgttgccacttcaggcgctttaggtgaa
gtcgctgtacatgatatacccactcgtcaacctctactcaacatcccaaacgctcatcat
ggcattgtttcctccttaactttttcacatacagctaagtctaatcgcggcgactccaga
ttacttagtgcaggcgttgataagtctgtcaagatgtgggacgctaactactccactgac
gctggtgataacgccggttttattgatgaagatgtcgctgagaaacactcacaaaaaccg
ttaagagtttggtcagctaatgctggtatcaactcaatcactcacaatcgcttacatcca
acattcgcaactgcatctaacgcaattcagctctgggaagaggcacgcactgaaccaatt
gagacctataaatggggtcacgataacatttctgctctcaaattctcccccaccgagcat
tccatcatggctgctgcaggtagtgatagaagtgtgtctttatgggatacgcgtgtcaac
ggtggtagtataggtcgtattatgactcctttcaagatgaatgacttgtctttcaaccca
atcctcccaacgctcctcctcacagcgggtgaagaccacaatctttacacatgggatata
cgcaatcttggcaatggtgcgctacagatatacaaagaccacgtagctgctgttactacg
tgtgactggtctccaaccggccaacagatcgctagtggtggctgggaccgcactgttaga
gtattcgacaagaatcacggtagatcgagcgattgctaccacactaagcgtatgcagaga
ctgatgaatgttcaattcagtctggatagcaagtacattctcactggctcagatgatggt
aatcttaggatgtggaagtcgagagcaagtgataagattggtcagattgatggtcgtgag
cgtgataagatgaactatagagatagccttaggcagagatggggtggtgtgggtgaagtt
cgcaaggtggagcgcagaagaaacacaccaaaggctattaggaacgcgtcgtcagctaag
aagactatggtggatgcgcaaagagctaaagaggagaatatacgcacgcacaccaaagct
ggacaggcgaagccaaagtctgagaagaagagggcggttgtgagtgagcagacgtga
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