Wallemia ichthyophaga: J056_001520
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Entry
J056_001520 CDS
T03457
Name
(RefSeq) DNA repair protein rhp54
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
wic
Wallemia ichthyophaga
Pathway
wic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J056_001520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wic03400
]
J056_001520
DNA repair and recombination proteins [BR:
wic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
J056_001520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Pkinase
Rad54_N
PK_Tyr_Ser-Thr
Helicase_C
ResIII
DEAD
Kinase-like
HDA2-3
AAA_22
ABC1
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
20374472
NCBI-ProteinID:
XP_009269423
UniProt:
R9ABV5
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MYRGKPVDNPGEPSSSTSSTGSASGAPSSSALSKPFKVPTVSSDRLRSAAPKRVAKKRVS
YKEDDLKENRKRGRTDDAYEDDSGVDRELGFDLKTLYPVYQVRSASAVLGRGFRIPSIKD
KSTGEQVVVPLSGVALGTRIQPPMPPRPLHDPMGEHAIVLYDPTVDFVEEVKDESESVAP
AEPPKPVDRRNRSVKEILGIKNRDELEKEVQQVPVVIDPRLSKVLRPHQVEGVKFLYRCT
TGLVSPSAHGCIMADEMGLGKTLQCIALLWTLLKQSPRPGRPTVDKCIIVCPSSLVRNWA
NEFTKWLGPNQVGCLVVDHKGTKEQLHNEVKQWCMASGRSVTLPVMIVSYETLRTLQSVI
GKAQVGLMMLDEGHRLKNSESTTFKTLTEIQCTRRVILSGTPIQNDLSEYFSLLQFANPD
YLGNKNEFRKNFENIILRGRDALATDKEKQMSEEKLKELNGLVSKFIIRRTNDILSKFLP
VKYEHVVFTGMSPLQLELYKFFINSPETQTMLKGKTSRPLKAITILKKLCNHPDLVSIKD
DIPGSKNLLPPDYVAERLDKNLPPNPSWSGKMMVLMRFIQRMRANSDDKIVLVSNYTQTL
DLLEKLFMALRWSFLRLDGTAAVSKRAKLVDRFNQPDSREFIFLLSSKAGGCGLNLIGAN
RLILFDPDWNPAADQQALARVWRDGQKKECFVYRFIGTGTLEEQVLMRQAYKQSLSACVV
DEAEDADRHFSKDLLREIFKHYPDTPSHMHDTFKCKRCDAETGKQKVKAPALLYGDVSTW
NHYSNACLENIHDDLLRAETGVGDVTKVFQGFAEFSLRFVVPLPPQNTANSELMATQPQP
DKKTSKFSKLFDKKDKDKDKDKDKEQVQSSAGSEHSQHSQQPQQPASRPPSRPPSRQQAK
RANSETNSDGGSKLSHALLDLLPAPLNRKSSASSHNKDKDDHNSTASLGKKYGVCDKIAI
GRGATAVVRLAHRWDRSDEKLFAVKEFRKRRKNETEKEYVKKLTSEFCISSTLHHNNIIE
TVDLVKDENSHWCEVMEYCPGGDLYAAIKKGQLGDRLAMGFFKQILSGISYLHSMGVAHR
DIKPENLLLDGRGSVKITDFGVSDVFRMCWEKKTHMSKGLCGSEPYIAPELFEQKEYDAR
LVDIWSAAIVFYCMTNQELPWRVARIADPTFSQYEQTWKRPPKLTELHPIKEFPRESHQI
ILKMLAPNPKDRCLIEEVLKDDWVKSIKTHQHGGSRDEYGS
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcgggaaaccagtcgataatccaggcgagccttcgtcgtcaacatcgtctaca
ggcagcgcatccggcgctccatcgtcctcagccctctccaagcctttcaaagtcccgaca
gtctcttcagacagacttcgatcagcagctccaaagcgcgttgcgaagaagcgagtgtca
tacaaggaagacgacttgaaagaaaatcgcaaaaggggcagaactgatgacgcatatgag
gatgatagcggcgtcgatagggaattaggtttcgacctcaagacactctatccagtatac
caagtacgctcagcgagtgccgtactaggacggggattcagaataccttcgatcaaggat
aaatcgacgggcgagcaagtggttgtaccgctgtcgggcgtcgcgttgggcacgcgcata
caacctcccatgccacccaggcctctacatgatcctatgggcgagcatgctattgtgctc
tatgatcctactgtggattttgtcgaggaggtgaaggatgaaagtgagagtgtggccccc
gctgaacctcctaagcctgtcgataggcgcaatcgctccgttaaggaaatactcggtatc
aaaaatagagacgagctcgagaaggaggtccagcaggtgcccgtcgtcattgatcctaga
ctatcgaaagtattacggccccaccaagttgaaggtgtcaagtttttgtacagatgtacc
actggtctcgtgtcgccgagcgctcatggttgcatcatggcagatgaaatgggtttaggt
aaaacacttcagtgtatcgctctgctctggactctgctcaagcagtcaccccgtcctggg
aggccgacagtggataagtgcatcatcgtatgtccaagctcgcttgtgcgaaattgggcg
aacgaatttacaaaatggctcggtccaaatcaagttggatgtttagttgtcgatcacaaa
ggcacaaaggagcaactgcacaacgaagtcaagcaatggtgtatggcatcgggaaggagt
gttactctaccagtcatgatcgtatcgtatgagactctccgaacacttcaaagtgtaatt
ggtaaagcgcaagttggtttaatgatgctcgacgaaggtcacagattgaagaattcagaa
tcgactacatttaagacactcactgagatacagtgtacacggcgagtcattctctcaggt
acacccatacagaatgacctatcagagtacttctcgttgcttcaattcgctaatcctgac
tacctcggtaataagaatgagtttaggaagaactttgaaaatatcattttgagaggtcgc
gatgccctcgcaacagataaggaaaagcagatgagtgaggagaagctgaaggaacttaat
ggattagtcagtaaattcattatacggcgtacaaacgacattctttcaaagttcttacca
gtcaagtatgagcatgtggtattcacgggaatgtcaccactgcagttggagctgtacaaa
ttctttatcaactctcctgaaacacaaaccatgctgaaaggaaaaacatcaagaccactg
aaagccataacgattctcaagaagctgtgtaatcatccagatctggttagcattaaggat
gatataccgggctctaagaatcttctacctcctgattatgttgcagagagattggataaa
aacctgccaccaaatccttcatggagtggcaaaatgatggtcttgatgagatttatacaa
cgcatgcgtgcaaactctgacgacaagattgtcttggttagcaattatacccagacgctc
gatctactcgagaagctcttcatggcactaaggtggtcattcctacgtttagacggaaca
gctgcagtttctaagcgtgcaaagctggtcgacagattcaatcagccagattcaagggag
ttcatcttcctcctctcctctaaagctggtggatgtggattgaatctgataggtgcaaac
agactgatattgtttgatccagactggaatccagctgcagatcagcaagcgcttgcgaga
gtgtggcgtgatggacagaagaaagaatgctttgtgtataggttcatcggtacaggtacg
ctagaagagcaagtcctgatgagacaggcatacaagcagtcgctgtcggcgtgtgtagtg
gatgaagccgaagacgccgatcgacacttctccaaggacttgctgagggagatattcaag
cattacccagatacgcctagtcacatgcacgatacgttcaagtgtaagcgttgtgatgca
gagacggggaagcagaaagtaaaagcgcctgcattgttatatggagatgttagcacgtgg
aaccactattcaaacgcgtgcctggagaatattcacgatgatttgctcagggcagaaact
ggagtgggtgatgtaaccaaagttttccaaggtttcgctgaatttagcttacgcttcgtt
gtaccattaccaccacaaaacacagcaaatagcgagttgatggctactcagccacagcca
gataagaaaacttcaaaattcagcaaattatttgataagaaggataaggataaggataag
gataaggataaggagcaggtgcagtcttctgcgggctcagagcactcgcagcattcacag
caaccacagcaaccagcttcacggccaccatcacggccaccttcaaggcaacaggcaaag
agggcaaacagcgaaaccaacagtgacggtggcagtaaactcagtcacgccctgttagat
ttattacccgcgccacttaatagaaaatcatcagcatcttcacacaataaggataaggat
gatcataattcaacagcttctttgggtaagaagtacggcgtttgtgataagatcgctatc
ggcagaggcgcaactgctgttgttcgattggcccatcgttgggatagatcagacgaaaaa
ttatttgctgttaaagaattcagaaagaggcgtaaaaatgaaactgagaaggaatacgtt
aagaagctcacttcagagttttgcatttcatccactttacatcataataacatcattgag
acagtagatttagttaaagatgagaatagccattggtgtgaagttatggagtattgtcct
ggtggtgacttgtacgctgctatcaagaaaggtcaacttggtgatagacttgctatgggt
ttctttaagcaaattctatccggaattagttatttacactctatgggtgtcgctcatagg
gatattaagcctgagaatttgttacttgatggtagaggttctgttaagattacagacttt
ggtgtctcagatgtatttagaatgtgctgggagaagaagacacacatgtcaaaaggtcta
tgtgggtcagagccttacatagcaccagagctattcgaacagaaagagtacgatgctaga
ttagttgatatttggtcagcagctatcgtattctactgcatgaccaatcaagagttgcca
tggcgagttgctagaatcgctgatccaactttctcacaatatgagcaaacatggaagaga
ccaccaaagttgacagagttacatccaatcaaggagttcccacgagaatctcatcaaatt
atattaaaaatgttagcaccaaatccaaaagataggtgtctgattgaggaggttttgaag
gacgattgggtcaagtcgattaaaactcatcaacatggtggtagcagagatgaatatggt
agctag
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