Wallemia ichthyophaga: J056_002379
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Entry
J056_002379 CDS
T03457
Name
(RefSeq) DNA ligase 4
Organism
wic
Wallemia ichthyophaga
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
BRCT_2
BRCT
Motif
Other DBs
NCBI-GeneID:
20375331
NCBI-ProteinID:
XP_009269919
UniProt:
R9AB17
LinkDB
All DBs
Position
Unknown
AA seq
1848 aa
AA seq
DB search
MSSPSRDEIKQAAASKQGDIRIEKDSTAYAEYHPIERPAGVSNTGSMKYAQLVSFFDNIT
NEKNVSMRSLKLAKLFDYHREHYGNDFYNLLRLMIPERERERSMFGIKETVLAKIYVELL
GLSPKHNDGHRLLSWKAPTAAHTVSGDFPSVLVDVMKNRVSYDSKSSFTIDEVNHKLDQL
SRAKSFQRKKDIMKEFAKRCDTEEQFWLVRILLKNLKISIRERSILSQFHPDAYALFEVT
TDLRTVAYRLYDPSMRLRDADSSVHLFQVFQPMLCKRNTIPDVHKKMPHGRWVVEEKMDG
ERIQLHRKGDRYKYWSRKAKDYTYLYGKSPTDGSLTPFIHTTFDSRVDEVVLDGEMLAYS
GAIDAVLPFGTLKKAAKGDIGTHPIFKVFDVLWVNGKDISAYPFKERQKVLRSIFTELPT
RFEHVSRWTVGDVVELKGSLERIILQKGEGLVVKSPLSTYEYGGRSDRWIKLKPDYFDEM
SETADLLVIGGNWSNSRNGVISTLFCALVDDREENIAADPQYILFARAGTGYSAQDLVII
NELFAKADTRKYTPASVYPGVKIGNETPDVVINPQQSFVVEIKASDINPSTQYPTGCTYR
FPRFKRLRLDKGSGDKSPFDPDSLFKWTEMDSMIKGIKASRSHQAEAKVKEKQAKPTRAS
KKQVISSRAVASVRADTRNYRNTLFEGCAFRILNGTNELEVKDLAVLIAERKGMALSHIP
RDEDCPEPLLVIAGKATAVQVSQLVKLQRRSILSAQWLLECVQYNCIVPLEGAGSGAYWV
YQCDVDSQLILDTLRPFFITPDHIPHEQAERLAHGQLDLEAVGEINELRFTQEPALQVEE
KVATIVPEEEDSETEKESLGESGDDGDETIQEGAFTAQKSPSPRLGPSQLTYTQTSSTRT
VTRQKGSTSNNFDDSSDEGDDSVKIKKEATQLFSPTTNPQSPHQENREDVQKEQPSIIRD
DADPDRTLEEDAVATLEEEENVKTSGTTGTLVLNQQEMHDKVDKGRRRSRVVAFDSDYKT
NSEIDVEDASAKKSKKIKQEGDSEEMHEHELGETSKASKQHESLNAADVDLSADHPREPE
VVEEAVVITSDDLDKPLLNVAVYVDDYENAITNDLFPRPSIMSKTDWTGIRDKITRLGGM
VAEVDDSRLTHIVIDENDKRRVEELFERTKRPKYRKLPTPGSATANSTAIYKDAIWGEKP
RPEFGVETIYDLFQHSAAHAGDKNFLGHRPYNPNKQRFERYYEYQSYNEIAQRRTNLGSG
ISQLVKQGDLGDSCFSGWTAGTWSKNCPEWQIADLSLHAFSRISVPLYDTLGNDSVEYVI
NHSENRLIFTSSSHLPQLYKILHNCPSVEAVIVLDGLDEPGAPQDGARVPGQLSRADVLK
LWAKNLNVRLYSLAQVEELGAIHQHPHIPPKPTDVLTISYTSGTTGWPKGAVHTHSSMCN
NILSLTTGMDEYVGHLLASYMPLAHVLQRALEFIAMVLLAPIAYTTGDILRLMEDLQIMQ
PELMVTVPRVLNRIYAGIKHQMDTPGVKGSLLTRAVAAKIDKMHKTSDTTHLLWDKLIFN
KIRQVLGGKIRLIITGSAPISPRVLDVLKVSLCIPIIEGYGLTETCICTRTIPSDPLSSG
YVGNMNPGFEIKLVDVPEMNYFSTDRPYPRGEICIRSKSSMREYYKDSDKTKESFTDDGF
FISGDIGQIDNHGRLKLIDRKKNIFKLAQGEYIAIEKLEGVFALCPTVMQLYIHADSLRS
YLVAVVVPDPLELGSVVGCDANDRQALDTAIASEKVRGMIMAEIDKASNHAGLKGFERIK
AVHITNDQFTIDNGLLTPTLKVKRNEVASKYKTTIDALYDANDKSAKL
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgcccagcagagatgaaattaagcaggcagcggcgagtaaacagggtgatatc
aggatagaaaaggactccactgcttacgctgaatatcacccaattgagcgtcctgctggc
gtttccaatactggatcaatgaaatacgcccagctagtctcattctttgacaacatcaca
aacgagaaaaatgtttcaatgcgctctttaaagttggcgaagctgtttgactatcaccgg
gagcattacggcaatgatttctacaatctactccgcttgatgatcccagagcgagagaga
gagcgcagtatgttcggcatcaaagagactgtcctcgcaaagatatacgttgagctactc
ggtctctcccctaagcacaatgatggtcaccgtctactctcctggaaagctcccaccgct
gcacatacagtcagtggtgacttccccagcgtgctggtagacgtaatgaaaaaccgcgtc
agctacgattcaaagtcatcgtttaccatcgacgaggtgaatcacaagcttgaccagctc
tcgcgcgccaagtctttccagcgaaagaaagacatcatgaaagaattcgcaaaacgttgc
gatacagaagagcaattctggctcgtgcgtatcttactaaagaatcttaaaattagcatc
cgcgagagaagcatcctgtctcaattccatccagatgcatacgcgctgtttgaagtgacg
acagatttgcgcacagttgcctacaggctgtacgacccgagtatgcggctgcgcgatgct
gatagctccgttcacctcttccaagtattccagccgatgttgtgcaagcgcaataccatc
cccgatgtccacaagaagatgccgcacggccgctgggttgtcgaggagaagatggacggc
gagcgcatacagctacatagaaagggcgacaggtataagtattggagtaggaaagctaag
gattatacctatttatatgggaaatccccaaccgatggcagccttacaccgtttattcac
accacattcgattctcgcgtcgatgaagtcgtgcttgatggagaaatgctggcgtattca
ggcgcaattgacgccgtactcccttttggcactcttaaaaaagccgcaaaaggcgatatt
ggtacacatccgatatttaaggtattcgatgtgctctgggtaaatgggaaagatatctct
gcatatccatttaaagagcgccagaaagttctccgctccatattcacagagctacctaca
cgcttcgagcatgtttcacgctggactgtgggcgatgtggtagagctaaagggatcgctt
gagcgtattatcctccaaaaaggcgaagggctggtggttaagtcgcccctatcaacatac
gaatatggcggtcgatcagatcggtggatcaagctgaaacctgactactttgatgaaatg
tcagagaccgccgatctgctagtaatcggaggcaactggtctaacagtcgcaatggagtg
atttccaccctcttctgcgcactagtggatgacagggaggagaacatagcagcggatcct
caatacatactcttcgcgcgtgctggaacaggctactcggcgcaggatctcgtcattatt
aatgagctattcgctaaagcagacacgcgcaagtacactcctgcatctgtataccctggt
gtcaaaataggcaacgagacaccggatgtagtcatcaaccctcagcaatctttcgtagtc
gagatcaaggcaagcgatatcaatccatcgacgcaatatcccaccgggtgcacctaccgc
tttccccgcttcaagcgcctcagattggacaagggcagcggggataagagccccttcgat
ccagacagtctgttcaagtggacggagatggacagcatgatcaaaggtataaaggcttcg
cgctctcatcaagctgaagctaaagttaaagaaaagcaagccaagccgacgagggcgagt
aaaaaacaggttatcagctcgcgtgctgtggccagcgtgagagctgatacacgcaactat
cgcaacacgctcttcgaaggctgtgcattccgaatactgaacgggacgaacgagctcgaa
gtgaaagaccttgcggtgctcatcgccgaaagaaaggggatggcactgtcgcacataccc
agagacgaagactgccctgaaccgctgctcgtcattgcaggtaaagctacagctgtgcag
gtctcccagctcgtcaagttgcaaagaagatctatcctgagtgcacagtggctgctcgag
tgcgttcaatataactgtatcgtgccactagagggcgctgggagtggtgcgtattgggtc
tatcagtgtgacgtcgatagtcaacttattttggataccctccgtcctttcttcatcacc
ccagatcatattccacacgaacaagcagaacgtcttgcccacggtcagctcgatttagag
gccgtcggtgaaattaatgaactgagattcacacaagagccagcgttgcaggtagaggag
aaggtggccacgattgtgcctgaggaggaagatagtgagacagagaaagaaagtctggga
gagagtggcgacgatggcgatgagactatacaagaaggcgcttttacagcccagaaatca
ccttcaccacggttaggaccatctcaactgacttatacacagacatcctcaactcgcaca
gtgaccagacaaaaaggtagcacgtctaataatttcgatgatagctctgatgagggtgat
gatagtgtgaagatcaagaaagaagcgactcagcttttctcaccgacgacgaatccacag
tcgcctcatcaggaaaatcgggaggatgtgcagaaggagcagccgtcgattatacgagac
gatgcagatcccgataggaccttggaagaagacgccgttgcgacgctcgaggaagaagag
aatgtcaagacatcaggtaccacaggaacactagtactcaatcagcaggagatgcatgat
aaggttgataagggcagaagacgtagtagagtggttgcgtttgacagtgattataaaact
aatagcgagattgatgtggaggatgcatccgccaagaagagcaagaaaataaagcaggaa
ggtgatagcgaggagatgcacgagcatgaacttggtgagacatcaaaagcatctaaacag
catgaatcacttaatgctgccgatgttgatttgtcagctgatcatccacgtgagccagaa
gtagttgaagaagcagtagtgattaccagtgatgatctagataaaccgctgttgaatgtc
gctgtgtatgttgacgattatgagaacgcaatcacgaacgacctgttcccgcgtccatca
ataatgagcaagacagattggaccggtatccgagacaagataacaaggcttggcggaatg
gtagcggaggtggacgacagcaggctaacgcatatagtaattgatgagaacgacaagaga
agagtggaggagctgtttgagcggacaaagcggcccaaataccggaagcttcctacgcct
ggttcagctacagcaaattctacagcaatctacaaagacgcgatctggggagagaaacca
cgcccagaatttggtgttgagactatctacgatctattccagcactcagctgcacacgct
ggcgataagaatttcttaggtcatcgaccatacaatcctaataagcaacgctttgaacgc
tactacgagtaccaatcatacaatgaaatagcccagcgccgcacaaatctcggctctggc
atctcacagctcgttaagcagggcgatttgggtgactcttgcttctctggctggacggct
ggcacgtggtccaaaaattgtccagaatggcaaatcgctgatctcagcttacacgctttt
tcgcgcatttctgttcctctctacgataccctcggcaatgacagcgttgaatatgtcatc
aaccacagcgaaaataggctcattttcacttcatcttcccatcttcctcagctttacaag
attctccacaactgcccgtctgtcgaagccgtcatcgtcctcgatggtctcgacgaaccg
ggtgctccccaggatggcgcacgcgtaccaggccagctcagccgcgctgacgtgctcaaa
ctctgggcgaagaatttgaatgtcagactttatagcctggcccaagttgaagagcttgga
gctatccaccaacaccctcacattcctccaaaacctaccgatgttttaacaatctcgtat
acttctggaacaacgggttggccaaaaggcgcagttcatacacatagcagcatgtgcaac
aatatcctttctttgactacaggcatggatgaatatgttggtcatctgctcgcaagctac
atgccactcgcacatgttctgcaaagagcactcgagttcatagccatggtgttgttggcg
cccatcgcttacactaccggcgacatactccgcttgatggaagatttgcagattatgcag
cctgaacttatggtcaccgtaccaagagttctgaatagaatctacgccggcatcaagcac
caaatggacactccaggtgtaaaagggtctcttctcacccgcgccgtcgctgccaagatc
gacaagatgcacaaaacatccgacactacccatctactctgggacaaactcatatttaac
aagattcgacaagttttgggtggcaagattaggttgataattacaggttcggcaccaatc
agtcctcgagtgctcgacgtgcttaaagtcagcctgtgcatcccgattattgaaggctac
ggtctcactgaaacgtgtatctgcacgagaacgattcctagtgatcctctgtcgtctgga
tatgttggaaatatgaacccaggcttcgagatcaagctggtagatgttcccgaaatgaat
tacttctcaactgataggccatatccacgcggggaaatttgcatcagatctaagagctcg
atgagagagtattacaaggattctgacaagacaaaagaatcattcaccgacgatggcttc
ttcatcagtggtgacattggccaaatcgacaaccacggccgtctcaagcttattgacaga
aaaaagaacatatttaagctggcgcagggcgaatatattgccattgagaagctggagggt
gtttttgcgttgtgtccgactgtcatgcagctttacatccacgcagatagcctcagatct
tatctcgtcgccgtggtcgtcccagatcctctcgaacttggttctgtggtaggctgtgac
gctaacgatcgccaagctcttgacacagcaattgcaagcgagaaagtgcgtggtatgatt
atggcggagatcgacaaagcatctaaccatgctgggctgaaaggcttcgaacgtatcaag
gctgttcacataactaatgaccagtttaccatcgataacggcttgctcacacctactctt
aaagtcaagcgcaatgaagtggctagcaagtacaaaaccacaattgatgctctatatgac
gcgaacgacaagtctgccaagctttga
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integrated database retrieval system
