Wallemia mellicola: WALSEDRAFT_56933
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Entry
WALSEDRAFT_56933 CDS
T03142
Name
(RefSeq) hypothetical protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
wse
Wallemia mellicola
Pathway
wse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WALSEDRAFT_56933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_56933
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
WALSEDRAFT_56933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
18472872
NCBI-ProteinID:
XP_006957513
JGI:
Walse1_56933
UniProt:
I4YE57
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MDKSKRFSLMAPKTPSDDGSFHHRRVASADAEPNGSFGSTLDRDSRNAPSGELQPLLSLV
SAHSKKTYFSGYLAARTVRLENGKPTKPGDSRSELQGVFVKLIGTVLNVWVRRDMEAAAA
QGSAVPPKYINIADGYAEIIGSILVSVPPPEYQRTVDHVFSLNYAGLNKQEYVAPDQKTL
NACVHAIRLASWEKKRLEELYTGHLLRILQKSNLPGNSGRQPFIEPRSPLVKGKLEGWVK
VRFVGTAKWQKLFLVLTNYRPSERKRSFFGGNSSSNIVNTMSSNSSLASHTSFPTPPQPA
AIASFYSQKNPKSSTKPVYTLTLATQAFAIFPERVELIGHSGLLKVEGILQNTSDDSAIA
SIAGLREDGWCLIMPELDEKTPATSAWAEMLKWLVGIHDAFGLYGRPRAYSWDPRDPKSL
FFSYPIGPQKHKLFLDAELAQTTDVNETRSWAIRANLLGILRERMLPPSTQARLKSSSSR
PSSTTLSSVGSRDGMSRGMTGSNGSLNGGLSASLSGRPLSLQPGAPSQLPLRQPPSISSS
INRSPLLGSRNPSGISNLSNNYLPETTEETGAENDASNNSNFSSPSLPPINEAHKQPGSS
NDRTPTPNEPVKETGSTSPEHVASDMVYNSTNDGSTINKQGYFDNPPIYSSQPLETPSDV
RSSPPVSTINTPGSFATGSVEEQTARAAQELRQKLSLGNAQIQERSNRSSRYEDEHIVPY
PDTPQSENVEGGSVASKYSQNTYNETSEEGPSEAYTEALGAHPEVDVDDERTPHVPVRQP
PTSKRASMQPISPAESNQTRSMQPISPAESNPARRSIQPVSPAETNSVRNSMPPISPLDA
HPTRDSMSQVSRSPGSPYQQGYQSPPRISSPPMPPIQGMPGMPPMQPMPGMPPMPGMPPI
DPNVMGNQAAFFQAMMAAQQAFQQAMWQYSQNPQGMQGPPPMQAMPGVPSMPGNPPNVHN
VHQQQRNQNIPNPTSPSQYSQMSPNSAYSQMSPVGQTSPQFPTQPSYQSFYAQQSPRNDD
I
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggataaatccaaaagattctccctaatggcacctaagacaccctccgatgatggctcg
tttcatcacagaagagtagcctctgctgacgctgagccaaacggcagctttggcagtaca
ctcgatagagactccaggaatgccccatctggagagctacagcctctattatctctagtc
agcgcacactctaagaaaacctacttctcaggctacttagcagcaagaaccgttaggttg
gagaacggtaaaccaaccaaaccgggcgatagcagatcagagctccagggcgtcttcgtt
aagttaataggaacagtactaaacgtctgggttagaagagatatggaagctgcggctgca
cagggttctgccgtaccaccgaaatatatcaacatcgcggatggctatgcagaaattatc
ggcagcatactcgtatctgtgccacccccagaatatcagcgtaccgtggatcacgtcttc
tcgctcaattatgcaggcttaaataaacaggagtatgttgcgcctgatcagaaaacacta
aacgcatgtgtacacgctataaggcttgcatcatgggagaaaaagcgcctcgaagaactc
tacactggacatttactccgcatcctacaaaagtcaaatctcccaggtaactccggtaga
cagccattcatagaaccacgttcaccgttagttaagggtaaattagaaggctgggtcaaa
gtacgtttcgtcggcacagcaaaatggcagaaactcttcctggttctcacgaattaccgc
ccatcagaacgaaaaaggtctttcttcggtggtaacagtagctccaacatagtgaacaca
atgtcatccaactcttcacttgcttcacatacttccttccctacaccgccgcagcctgct
gcgattgcatcattctattctcaaaaaaatcctaagtctagtactaaaccagtctacacg
ctcacactcgcgactcaagctttcgcaatattccccgaacgtgttgaacttattggacat
agtggattgctcaaagtcgaaggtattttacagaatacatctgatgatagtgctattgca
tcaatagcaggattgagggaagatggatggtgtctcattatgccggaattagacgagaaa
acaccagctacatccgcatgggctgagatgctcaaatggctggttggaatacatgatgct
ttcggattatatggccgcccgagggcatacagttgggatccacgtgacccaaagtcactc
ttctttagttacccaatcggacctcagaagcacaagctattcttggatgctgagttggct
cagactacagacgtcaatgagacccgctcgtgggctatcagagcgaacctcttgggtatt
ctcagagagagaatgttaccaccatctacccaagcccgtttgaaatcgtcatcttctcga
ccatcaagcacgacgttgagctccgtaggtagccgagatggtatgagcaggggtatgaca
ggttctaatggaagtctcaatggcggtctcagtgctagtctcagtggcaggcctctatct
ctccaacctggtgcgccatctcagttgccccttcgccaaccacctagtatctcgtcatcg
atcaatagatcgcctttgcttggaagtaggaatccaagtggtataagcaatctcagcaat
aactatctccctgagaccaccgaagaaaccggcgcagaaaatgacgcttctaacaacagc
aactttagctcaccaagcttaccacccattaatgaggcacacaagcaacctggatcaagt
aatgaccgcacaccaacaccaaatgaacctgtaaaagagactggttcaacatctccagag
cacgttgcatcagacatggtatacaattccacaaatgacggatcaacaatcaataaacaa
ggctacttcgataatcctcctatatattctagccagccgctcgagacaccaagcgatgta
cggtcgagtccaccggtaagcaccatcaatacccctggcagcttcgctaccggtagtgtt
gaagagcagactgcgagagctgctcaggaactccgacaaaagctctccctgggcaatgcc
caaatacaggagagatcgaacagatcatcgaggtacgaagatgaacatatcgtaccatat
ccagatacaccccaatctgagaacgtggaaggtggctctgttgcgtccaagtattcacag
aatacttataacgagacgtctgaagagggtccaagtgaggcttatactgaagccctcggt
gctcacccggaggtagatgtagacgatgagaggacacctcatgttcctgtcaggcagcca
cctacatccaaacgagctagtatgcaacctatcagtccagctgagtctaatcaaaccaga
agtatgcaacccatcagtccagcggaatctaatccagctaggagaagtatacagccggtc
agtccagctgaaactaactcagttagaaatagcatgccgccaattagcccacttgatgca
catcctacaagggatagcatgtcccaagtctccagatccccaggtagcccttaccaacaa
ggataccagtcaccaccacggatatcttcaccgcctatgccaccgatacagggtatgccg
ggaatgcctccaatgcaacctatgccaggtatgcctcctatgccgggtatgccaccaatc
gatcctaatgtaatgggtaaccaagctgctttcttccaggctatgatggcagctcagcag
gccttccagcaagctatgtggcaatacagtcaaaatccgcagggaatgcagggaccacca
cctatgcaagctatgccaggtgtaccaagcatgccaggcaatccaccaaatgtgcataac
gttcaccaacagcagcgcaatcaaaacattcctaacccaacatcaccatcacagtactcc
cagatgtcgccaaattcagcatactcccaaatgtcaccagttggtcagactagtccccaa
tttcctacacaaccttcttatcagagtttttacgcccaacagagtcctcgtaacgatgat
atttaa
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