Wallemia mellicola: WALSEDRAFT_60044
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Entry
WALSEDRAFT_60044 CDS
T03142
Symbol
Rpd3p
Name
(RefSeq) histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
wse
Wallemia mellicola
Pathway
wse03082
ATP-dependent chromatin remodeling
wse03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
WALSEDRAFT_60044 (Rpd3p)
03083 Polycomb repressive complex
WALSEDRAFT_60044 (Rpd3p)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
wse03036
]
WALSEDRAFT_60044 (Rpd3p)
Enzymes [BR:
wse01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
WALSEDRAFT_60044 (Rpd3p)
Chromosome and associated proteins [BR:
wse03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
WALSEDRAFT_60044 (Rpd3p)
HDAC complexes
Sin3A-HDAC complex
WALSEDRAFT_60044 (Rpd3p)
BRAF-HDAC complex
WALSEDRAFT_60044 (Rpd3p)
REST complex
WALSEDRAFT_60044 (Rpd3p)
SHIP complex
WALSEDRAFT_60044 (Rpd3p)
MiDAC complex
WALSEDRAFT_60044 (Rpd3p)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
WALSEDRAFT_60044 (Rpd3p)
Heterochromatin formation proteins
Other heterochromatin formation proteins
WALSEDRAFT_60044 (Rpd3p)
Chromatin remodeling factors
NuRD complex
WALSEDRAFT_60044 (Rpd3p)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
18473704
NCBI-ProteinID:
XP_006957637
JGI:
Walse1_60044
UniProt:
I4YEJ5
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MFTPLENTRNKRVCYFHDTDIGHYHYGPGHPMKPTRVKMCHSLVMNYGLYKKMEIFRAKP
ATRKEMTQFHTDEYVDFLNRISPDNMDSYAKEQAKFNVGDDCPVFDGLFEYCSISAGGSM
EGAARLSRNKTDIAINWAGGLHHAKKAEASGFCYINDIVLGILELLRYHDRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKFGEYFPGTGDLRDIGFGKGRKYSLNVPLRDGITDDNYK
SIFEPVIGKVVEWYKPSAIVLQCGSDSLSGDKLGCFNLSMRGHANCVSFVKQFNLPLLML
GGGGYTIRNVSRAWAYETGLAAGQELSPTLPTTEYIDYFGPSYKLDVPSSNMEDLNTSAY
LSNLKSAIFENLRDKDFAPSVQMQPIPRMNHDDDDDNKREDLDDPNERRPQRLWDKTIQR
DDEFSDSEDEGEGGRRNEQSYAKAQPTI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgttcacaccgctagaaaatacgagaaataagcgtgtgtgttacttccacgatacagat
attggtcattatcattatggtcctggacaccctatgaaacccacaagggttaaaatgtgt
catagtctagttatgaactacggtttatataagaaaatggaaatattccgcgctaaacca
gctactcgtaaagaaatgactcaattccataccgatgagtatgtagatttccttaacagg
atcagtccggataatatggattcgtacgctaaagaacaagctaaatttaacgttggcgat
gactgccctgtattcgacggtttattcgagtattgttccatttcagcaggtggttcgatg
gaaggtgcagccagactgagtagaaacaagacagacatcgctataaactgggcaggtggt
cttcaccacgctaagaaggctgaagcgtctggtttttgctacataaacgatatagttttg
ggtatactagagctattaagataccacgacagagttctctacattgatatcgacattcac
catggagatggtgttgaggaagctttttacacaactgatagggttatgacagtatcattt
cataaatttggagagtatttccccggcactggtgatcttagggatattggtttcggcaaa
ggaagaaaatactctctgaatgtgcccctaagggatggtatcactgacgataattacaag
agtattttcgagcccgtcatcggtaaagtagtcgaatggtacaaaccctcagctatagtt
ctacaatgtggatcagacagtctaagcggtgacaaacttggttgtttcaacttgagtatg
cgaggacacgcgaactgtgtctcatttgttaaacaatttaatctcccgcttttgatgctc
ggtggtggtggatacaccattcgaaatgttagtcgagcatgggcgtacgaaactggattg
gcagctggccaagaactcagtccaacactaccaacaactgaatacatcgactacttcggt
ccttcttacaaattagacgtcccttcatctaacatggaagatctcaatacatctgcatac
ctatctaatctcaagtcggccatatttgaaaatcttcgcgataaagatttcgcacctagc
gtacaaatgcagccaatcccacgaatgaatcatgacgacgacgatgacaacaaacgggaa
gacctcgacgacccaaatgaaaggcgtccgcagagactttgggataaaaccatccagcgt
gatgatgaattcagcgatagtgaagatgaaggcgaaggtggaaggcggaatgagcagagt
tacgcgaaagcacaaccaactatttag
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