Xanthomonas albilineans: XALC_2255
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Entry
XALC_2255 CDS
T01160
Name
(GenBank) putative atp-dependent helicase protein
KO
K03578
ATP-dependent helicase HrpA [EC:
5.6.2.6
]
Organism
xal
Xanthomonas albilineans
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
XALC_2255
Enzymes [BR:
xal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
XALC_2255
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
HA2_N
nSTAND3
SRP54
AAA_30
NACHT
T2SSE
AAA_25
ABC_tran
AAA_23
TsaE
Motif
Other DBs
NCBI-ProteinID:
CBA16737
UniProt:
D2UEZ1
LinkDB
All DBs
Position
complement(2683805..2687932)
Genome browser
AA seq
1375 aa
AA seq
DB search
MNAIEKHPLAARLRERRAAIDGALTRDRGRLLGLWSRWQAAPGNAALESAFEQALDASRT
RCAARAAAQPAIVLDPQLPIAREAERIVALIRAHQVVVIAGETGSGKTTQLPKLCLIAGR
GAAGMIGCTQPRRIAARAVAARVAEELRTPVGETVGFQVRFNDRVGEQTLVKFMTDGILL
AEIASDRWLSSYDTIIVDEAHERSLNIDFLLGYLKQLLRKRPELKVIVTSATIDTARFAA
HFEDAPVIGVEGRTYPVEVRYRPLQDESGDTDASGDSAGERTVNEAILAAVDEITRLDPR
GDVLLFLPGEREIRDAHQALERRKYRETEVLPLYARLSASDQDRVFNPGPRRRLVLATNV
AETSLTVPRIRYVVDPGYARVKRYSPRQKLDRLHIEPISQASANQRKGRCGRIAEGICYR
LYAEADFQARPMFTDPEIRRSSLAGVILRMLQLGLGRMEDFPFLEPPDERAVADGWQQLV
ELGAVGEPDRHGVRKLTEIGRKMARLPVDVKLARMLVAAQQHACLRPMLVIAAFLGIQDP
RERPPEAREAADNAHAKFADARSEFVGILRLWDGYRQAHEELTQSKLRDWCARHFLGFLR
MREWRELHRQLHLLCAELGWSEEPASALLQPLLTAAAAPAPARDAETAARMTRGQLHRAA
RLAREGRGASQTLAPTPSDTRATAPIGDAETPRASERVRAAAYQSLHRALLAGLPTQVGH
RTEKGDFLAPRQRRFLLFPGSTLARKPPPWVLPATLLDTQKIWGLTNAAIEPDWVIAEVP
HLLARKHFDPHWSRAQGQVLASEQISLFGLVLAPKKPVHYGRIDPSAAHDLFVRQALVPG
EINTRASFVVDNQKVLAQAHEEEAKLRRAGIVADEDWQARWYLDRIPAEIHSTAGLDAWW
NALSPEQRRALHWSLVDLLPGEGSAADRYPKYFALGDARLALHYRFEPGAADDGVTLEVP
VHLLNALDPARLSWLAPGFVADKAAALIRSLPKALRRNYVPAPDFARAFYEAFAQPSADD
LRGELARFLQRATGVPLSPLDFDESALEPHLRMHLRLRDETGKVLAESRDLEELRARFGD
RAGRAFAARAGREMAATGLREFPLTPIPLHVPGEAGVPAYPALVDEGDSVALRIFADRAQ
AETEHPRGVRRLLEIALTDKLKQARKQLPVSPKTSLLYAAIESQERLRGDLVDATLNALL
EQGLDTIRDADSFAQRRDTVAKQLFGEAMERLKLAEAIMSAAAELKPQLESPLMGWASGN
LDDMRTQLAALMPPGFLRETPAHALAQFPRYLRAMLLRAERAKRDPARDQARMLELKPFV
DVLTEAAVAGRRDDPQWQALRWDLEELRVSVFAQELGAKSGISAKKLAQRVAALR
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgatcgagaaacatcccctggccgcgcgcctgcgcgaacgccgtgcggcgatc
gacggcgccctgacccgcgaccgtgggcgtctgctcggcctatggtcgcgctggcaggct
gcgcctggcaatgccgcgttggaaagtgcgttcgaacaggcgctggacgcgtcgcgcacg
cgctgcgcggcacgcgcggcggcgcagccggccatcgtgctggatccgcaattgccgatc
gcgcgcgaggcagagcggatcgtcgcgttgatccgcgcgcatcaggtggtggtgatcgcc
ggcgagaccggctcgggcaaaaccacgcagttgccgaagttgtgcctgattgccggtcgc
ggcgccgccggcatgatcggctgcacccagccgcggcgcatcgccgcgcgcgcggtcgct
gcccgggtggccgaggagttgcgcacgccggtgggcgaaacggtcggcttccaggtgcgc
ttcaatgatcgggtcggcgaacagaccctggtcaagttcatgaccgatggcatcttgctg
gccgagattgccagtgaccgctggctgtccagctacgacacgatcatcgtcgacgaggcg
cacgaacgcagcctcaatatcgattttctgctcggttatctcaagcaattgctgcgcaaa
cgcccggaattgaaggtcattgtcacctcggccacgatcgacaccgcgcgcttcgctgcg
cacttcgaggatgcgccggtgatcggcgtggagggccgcacctatccggtggaggtgcgc
taccgaccgctgcaagacgaaagcggtgacaccgatgccagcggcgacagcgccggcgag
cgtacggtcaacgaggcgatcttggcggcggtggacgaaatcacccggctggacccgcgc
ggcgatgtgctgctgtttctgcccggcgaacgcgagatccgcgatgcacaccaggcgctg
gaacggcgcaagtaccgcgaaaccgaggtgttgccgctgtacgcgcggttgtccgccagc
gatcaggatcgggtgttcaatcccggcccgcggcggcggctggtgctggccaccaacgtt
gccgagacctcgctgaccgtgccacggatccgctacgtggtcgatccggggtatgcgcgg
gtcaagcgctacagtccgcggcaaaagctggaccggttgcatatcgagccgatttcgcaa
gccagcgccaaccagcgcaagggccgctgcgggcgtatcgccgagggcatctgctaccgc
ctgtatgccgaggccgatttccaggcacggccaatgtttaccgatccggagattcgccgc
tccagcctggccggggtgatcctgcgcatgctgcaattagggctggggcgcatggaagac
tttccgttcctggagccgccggacgaacgtgctgtggccgatggctggcagcaactggtg
gaactgggcgcagtcggcgaacccgaccgccacggcgtgcgcaagctcaccgaaatcggc
cgcaagatggcgcggttgccggtggacgtgaaactggcgcggatgctggtagcggcgcag
cagcacgcttgcttgcggccgatgttggtgatcgccgcgttcctgggcattcaggacccg
cgcgagcggccgccggaagcgcgcgaagcggcggacaacgcgcacgctaaattcgccgat
gcgcgttcggagtttgtcggcatcctgcgcctgtgggacggctaccggcaagcgcacgag
gaactgacccaatccaaactgcgcgactggtgcgcacggcatttcctcggtttcctgcgc
atgcgtgagtggcgcgaattgcaccgccagttgcacctgctgtgcgccgagctgggctgg
agcgaggaacctgcgtctgcgttgctgcaaccgttgttgaccgctgccgccgcgccagcg
ccggcgcgcgatgcggaaaccgcggcgcgcatgacccgaggacaactgcatcgtgctgcg
cggctggcgcgcgagggacgcggcgcatcgcagacgctcgcacccacgccgagcgacacc
cgtgcgaccgcaccgattggagacgccgagacgccgcgcgccagcgagcgcgtgcgtgcc
gcggcctaccagtctctgcatcgcgcattgctcgccgggctgccgacccaggtcggccac
cgcaccgagaaaggcgattttctggcgccgcggcagcggcgtttcttgttgtttcccggc
tcgacgctggcgcgcaagccgccgccgtgggtgctgccggcgacactgctggacacgcaa
aagatctggggtctgaccaatgcggcgatcgaaccggattgggtgatcgccgaggtgccg
cacttgctggcgcgcaagcatttcgacccgcactggtcgcgtgcgcaaggtcaggtgttg
gcctccgagcagatcagcctgttcgggctggtgttggcgccgaagaagccggtgcactac
gggcgtatcgatccgtcggctgcgcatgatctgttcgtgcgtcaggcgctggtgccgggc
gagatcaacacccgcgccagtttcgtcgtcgacaaccagaaggtgctggcgcaggcgcac
gaagaagaagccaaactacggcgtgccggcatcgtggccgacgaggattggcaggcgcgc
tggtacctggaccggattcctgccgagattcattctaccgccggcctggacgcctggtgg
aatgcgctgtcgcccgaacagcgccgcgcgctgcactggtccttggtcgatttgttgccg
ggcgagggtagcgcggccgaccgctatcccaagtatttcgcgttgggcgatgcgcgattg
gcgctgcattaccgcttcgagccgggcgctgccgacgatggcgtgaccctggaggtgccg
gtacacctgctcaacgcgttggacccggcacggctgtcgtggctggcgcctggcttcgtc
gccgacaaggccgccgcgctgattcgcagcttgcccaaggcgctacggcgcaactatgtg
cccgcgccggactttgcgcgcgctttttacgaggcgtttgcccaacccagtgccgatgat
ctacgcggcgaactagcgcggtttctgcagcgcgcgacaggcgtgccgctgagcccgctg
gacttcgacgaaagcgcgctggagccgcacctgcgcatgcatctacgtctgcgcgacgag
acgggcaaggtgctggccgaatcgcgcgatctggaggagttgcgggcgcgcttcggcgac
cgtgccgggcgtgcgttcgcggcgcgtgccggtcgtgagatggcagccaccgggctgcgc
gagtttccgctgacaccgatcccgttgcatgtgcctggcgaagccggggtgccggcatat
ccggcgctggtggacgagggcgatagcgtggcgttgcgcattttcgccgatcgcgcgcag
gccgagacggagcacccgcgcggcgtgcgacggttgctggagatcgcactgaccgataag
ctcaaacaggcgcgcaagcaattgccggtgtcgcccaagaccagcctgctgtacgcggcg
atcgaatcgcaggagcggctgcgcggggatctggtggacgcgacgttgaacgcgctgctg
gagcaggggctggacacgatccgcgatgccgacagcttcgcccagcgtcgcgacaccgtc
gccaagcagctattcggcgaagcgatggaacggctgaagctggctgaggcgatcatgagc
gcggcggcggaactgaaaccgcagttggaatcgccgctgatgggctgggccagcggtaat
ctggacgacatgaggacgcaactggcggcactgatgccgcctgggttcctgcgcgagacg
cccgctcacgcgctggcgcaatttccgcgctatctgcgcgcgatgctactgcgcgccgaa
cgtgccaaacgcgatccggcgcgcgaccaggcgcggatgctggaactcaagcccttcgtc
gatgtcctgacggaggctgccgtggctgggcgccgtgacgatccgcagtggcaggcgctg
cgctgggatctggaagaattgcgggtctctgtgttcgcgcaggaattgggcgccaagtcc
ggtatttcggcgaagaagttggcgcagcgcgtggcggctttgcgctga
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integrated database retrieval system
