KEGG   Xanthomonas sp. ISO98C4: AC801_19115
Entry
AC801_19115       CDS       T06033                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
xan  Xanthomonas sp. ISO98C4
Pathway
xan03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xan00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AC801_19115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xan03019]
    AC801_19115
Enzymes [BR:xan01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AC801_19115
Messenger RNA biogenesis [BR:xan03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AC801_19115
SSDB
Motif
Pfam: RhlB DEAD Helicase_C ResIII Helicase_C_2
Other DBs
NCBI-ProteinID: AZU31915
UniProt: A0A3Q9Q0R5
LinkDB
Position
complement(4461692..4463404)
AA seq 570 aa
MSDKPLTDVTFSSFDLHPALIAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKT
LAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYG
GVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI
RFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETESITAARVRQRIYFPS
DEEKQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLL
NRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF
ACERYAMSLPDIEAYIEQKIPVESVTSELLTPLPRAPRVPVVGEEADEDAGDSVGTIFRE
AREQRAAEEQRRGGGRGGPGGSRSGSGGGRRDGAGADGKPRPRRKPRVEGQAPAAAASTE
HPVAAAAAQAPSAGVADAERAPRKRRRRRNGRPVEGAEPAVASTPVPAPAAPRKPTQVVA
KPVRAAAKPSGSPSLLSRIGRRLRSLVSGN
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgagcgacaagccgctgaccgatgtgaccttttcctcgttcgacctgcatccggccttg
atcgccgggctggagagcgccgggtttacccgctgtaccccgatccaggcgctgaccttg
ccggtcgcgctgccgggcggcgatgtcgccggccaggcccagaccggtaccggcaagacc
ttggcgtttctggtcgcggtgatgaatcggctgctgatccgcccggccctggccgaccgc
aagccggaagacccgcgcgcgctgatcctagcgccgacccgcgagctggcgatccagatt
cacaaggacgcagtgaagttcggcgccgaccttggcctgcgctttgcgctggtctatggc
ggggtggattacgacaagcagcgcgagctgttgcagcagggcgtggacgtgatcatcgcc
accccgggccgtctgatcgactacgtcaaacagcacaaggtggtctcgctgcacgcctgc
gagatctgcgtgctggacgaagccgaccgcatgttcgacctgggcttcatcaaggacatc
cgcttcctgctgcggcgcatgcccgagcgcggtacccggcagacgttgttgttctcggcc
acgctcagccaccgcgtgctggagctggcctacgagcacatgaacgagccggagaagctc
gtcgtcgaaaccgaaagcatcaccgccgcgcgggtgcgccagcgcatctattttccgtcc
gacgaagagaagcagacgctactgttgggcttgctgtcgcgcagcgaaggcgcgcgcacc
atggtgttcgtcaacaccaaggccttcgtggagcgcgtggcgcgcaccctggagcggcat
ggctaccgggtcggcgtgctgtcgggcgatgtgccgcagaagaagcgcgagtcgctgctc
aaccgcttccagaaaggccagctcgaaatcctggtcgccaccgacgtggccgcgcgcggt
ctgcatatcgacggcgtcaaatacgtctacaactacgacctgccattcgacgccgaagac
tacgtccatcgcatcggccgcaccgcgcgtctgggcgaggagggcgatgcgatcagcttc
gcctgcgaacgctatgcgatgagcctgccggacatcgaggcctacatcgagcagaagatt
ccggtcgagtcggtgacgtccgaactgctgacgccgctgccgcgcgcgccacgcgtgccg
gtggtaggcgaagaggccgacgaggacgctggcgacagcgtgggcacgatcttccgcgag
gcgcgcgagcagcgtgccgccgaagaacagcgtcgcggtggtgggcgcggtggcccgggc
gggtcgcgcagcggcagtggcggtggtcgccgcgatggcgccggtgccgatggcaagccg
cgtccgcgtcgcaagccacgggtggaaggccaagcgcctgcagctgcggcgtcgaccgaa
catccggtggctgcagcagcggcacaggcgccttccgcgggcgtggccgatgccgagcgc
gcaccacgcaagcgtcggcgtcgtcgtaacggtcgtccggtcgagggtgccgagccggca
gtggcatccacgccggttcccgcacctgccgcaccgcgcaagcccacccaggtggttgcc
aagccggtgcgtgccgccgccaagccgtcgggcagcccgtcgctgctcagccggatcggc
cgccgactgcgttcgctggtctccggcaactga

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