Xanthomonas axonopodis Xac29-1: XAC29_21830
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Entry
XAC29_21830 CDS
T02500
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xao
Xanthomonas axonopodis Xac29-1
Pathway
xao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XAC29_21830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xao03400
]
XAC29_21830
Enzymes [BR:
xao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XAC29_21830
DNA repair and recombination proteins [BR:
xao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XAC29_21830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Nod_GRP
Motif
Other DBs
NCBI-ProteinID:
AGH79747
UniProt:
M4U3N1
LinkDB
All DBs
Position
complement(5107796..5111200)
Genome browser
AA seq
1134 aa
AA seq
DB search
MHATSAPDFRLYPSNALDTLAALLAQELRRPMPGQPLLQPEVVLIPQVAMRRWLQSTLAA
EHGVAANLEFLTPGEFVARALERNLGAADDDLDMATTQWRLYAALQSDLGSDAALAPLAG
YLSDGDALKPWALAGELGSVFEKYQAWRRDWLLRWEAGADPDDPQARLWRSIAAGRQYRA
RRIGQYLDRYTRADGPLPQGLPPRVFAFAILNISPDVLRVLATQARVGTLHFYLPTPTQG
YWGDLQTLRQRRREDGAVQLFAEQVQENPLLQAWGAAGRDFMALVGDYEVVHPLAEIAAY
ADPLDSGRRTLADGGLGDSLLRRMQSDLFHRRGPAADARLPAVNLHDPSLQVHACHTRLR
ELQVLHDQLRALLDDARFDPPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALAD
ASPLASEPLAEVFLALLGLPIARFGLHEILDLLASAPIAEAAGLDEAGLERLRNWLHAAG
ARWGLDAAHRRQHQAPGDDAYTWRFALDRLLLGHASGADEDIDGVAPWPQLEGSALAALD
TLLRLLRVLERHQAALADAMTPVEWRERLLGLLEALIPATPTAPRAQRALDRLRTLIDQF
ARDAVRAEYAGKVPAEVVRAHFAAVLGDSDTRAPLLTGGISFGRMVPMRLLPFRVICLLG
MNDGDFPRRDPAAGLNRLTAELGTERRRHGDRSTREDDRFLFLQLFASAQEVFYLSYLGA
DARDGSVREPSVLVSELLASAAQYHAASNALDTLVVRHPLQPFAAAAFGALGDDGADPRR
FSYRRQWRPAVDSLVGQRQPLAPWVAGALPAEAIALPASMSIDALRRLLTDPAGQFLRHR
LGMRLPDPAGEDSDLEPLLAPTRGLDHYGLQQQVFEAALAGDTEGLYERLRARALLPSGP
LGRRQLDERVAQLRPYADAFRQWRGESPAQSRRLQVQIGEIELHGRVPGWYASGVGRVQV
GALSGRSAIRHGLEWLLLRAAGEHAPYVRFFEHDDGLGPHPIDAQPLSQTQAHTALAELL
QLYRQGVQTPLAFAPYSSWKYHQAARGGDLDKAIKEAAGQWQSGFGWSESHSPELRLVTR
GRDPFADAQRFAAFATTSHRVYALLEQGNTGAPLETERVIDSWRHWHGAREDAE
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccacttccgcgcccgatttccgtctttatccatccaatgcgctggataccctg
gctgccttgctcgcgcaggagttgcgccggccgatgcccgggcagccgttgctgcagccg
gaggtggtgctgattccacaggtggcgatgcggcgctggttgcagtccacgcttgcggcc
gagcacggtgttgcggcgaatctggaatttctcacgcccggcgaattcgtcgcgcgcgcg
ctggagcgcaacctcggcgcggccgacgacgacctggacatggcgaccacgcagtggcga
ttgtatgcggccctgcaatcggacctgggcagcgatgcggcgttggcgccactggccggc
tatctgtccgatggcgatgcgctcaagccgtgggcgctggccggcgagctgggcagcgtg
ttcgaaaaataccaggcatggcgccgcgactggctgctgcgctgggaagcgggcgccgat
ccggacgacccgcaggcacggttgtggcgcagcatcgccgccggccggcaataccgtgca
cggcgcatcggccagtatctggaccgctacacgcgtgccgatggtccgttgccgcaaggc
ctgccgccgcgcgtgttcgccttcgccatcttgaacatctcgccggacgtcttgcgcgtg
ctggccacgcaggcgcgcgtgggtacgctgcacttctatctgcccaccccgacgcagggc
tactggggcgacctgcagaccttgcggcaacgccggcgcgaagacggcgccgtgcaactg
ttcgccgagcaggtgcaggaaaacccgttgctgcaggcctggggcgcagccgggcgcgac
ttcatggcgctggtgggcgactacgaagtggtgcacccgctggcggaaattgccgcctac
gccgacccgttggactccggccgccgcacgctggccgatggcgggctgggcgacagcctg
ttgcggcgcatgcagagcgatctgttccatcgccgcgggcctgcagctgacgcgcgattg
ccggcggtgaatctgcacgaccccagcctgcaggtgcacgcctgccacacgcggctgcgc
gagttgcaggtattgcacgaccaactgcgtgcgctgctcgacgatgcacgcttcgacccg
cccctgcagccgcgcgagatcgcggtgctgtcgcccaacatcgacccgtacgtgccgtat
ctggatgcggtgttcggcagccacggcaacgacgacgcgctgccctacgcgctggccgat
gccagcccgttggcgagcgaaccgctggccgaagtgttcctcgccttgctcggtttgccg
atcgcgcgtttcgggctgcatgaaatcctcgacctgctggccagcgcgccaatcgccgaa
gcggccggcctggacgaagccgggctggaacgcctgcgcaattggctgcacgcggccggc
gcgcgctggggcctggatgcggcgcaccggcgccagcaccaggcaccgggcgacgatgcc
tacacctggcgtttcgcgctggaccggctgctgctcggccatgccagcggcgccgacgag
gacatcgatggggtagcgccgtggccgcagctggaaggcagcgcactggccgcactggac
accttgttgcggctgttgcgcgtgctcgaacggcatcaagccgcgctggccgacgcgatg
acaccggtcgagtggcgcgagcgtttgctgggtctgctcgaggcattgatcccggccacg
ccgactgcgccgcgcgcgcaacgcgcgctggatcgcttgcgcaccttgatcgaccagttt
gcccgcgatgcggtgcgcgccgagtacgccggcaaggtgccggccgaggtggtgcgtgcg
catttcgccgcggtgctgggcgactcggatacgcgtgcgccgctgctcaccggcggcatc
agtttcgggcgcatggtgccgatgcgcttgctgccgttccgcgtgatctgcctgctcggc
atgaacgatggcgacttcccgcgccgcgacccggccgccgggctcaatcgcctcaccgcg
gaactgggcaccgagcgtcgccggcacggcgaccgttccacgcgcgaggacgaccgcttc
ctgttcctgcagttgttcgcctccgcgcaagaggtgttttacctcagctatctcggtgcc
gatgcgcgcgatggcagcgtgcgcgagccgtcggtgctggtcagcgaattgctggcgagc
gctgcgcagtaccacgccgccagcaacgcgctcgacacgctggtggtgcggcacccgttg
cagccattcgccgccgccgcgttcggtgcgctgggcgacgacggcgccgatccgcgccgt
ttcagttatcgccggcaatggcggccggcggtggacagcctggtcggccagcggcagccg
ctggcgccgtgggtggccggtgcattgccggccgaagcgatcgccttgccggccagcatg
tccatcgacgcgctgcgccgcttgctgaccgaccctgccgggcagtttctgcgtcatcgg
ttgggcatgcgcctgcccgatccggccggcgaagacagcgatctggaaccgttgctcgcc
cccacgcgcgggctggatcactacggcttgcagcagcaggtattcgaagctgcattggcc
ggcgacaccgaaggcctatacgagcgcctgcgcgcgcgcgcgctgctgccgtccggcccg
ctggggcggcgccagctcgacgagcgcgtggcccaattgcgcccgtatgccgacgcattc
cggcagtggcgtggcgagtccccggcccagtcgcgccggctgcaggtgcagattggcgag
atcgaactgcacggccgtgtgccgggctggtacgcaagcggcgtggggcgcgtgcaggtc
ggcgcgctcagcgggcgcagcgccattcgccacggcttggagtggttgctgctgcgcgcc
gccggcgaacacgcgccgtacgtgcgtttcttcgaacacgacgacggcctgggcccgcat
cccatcgatgcacaaccgctgtcgcaaacgcaggcgcataccgcattggccgagctgctg
cagctgtatcgccagggcgtgcagacaccgctggccttcgcgccgtacagcagctggaaa
tatcaccaggccgcgcgcggcggcgacctggacaaggccatcaaggaggcggccgggcag
tggcaatcgggctttggctggagcgaatcgcatagcccggaactgcgcctggtcacccgc
ggccgcgacccgtttgccgacgcgcaacgcttcgccgcgttcgccaccaccagccatcgt
gtgtacgcattgctcgaacaggggaacaccggcgcgccactcgagaccgagcgggtgatc
gacagctggcgacactggcacggcgcgcgcgaggatgccgaatga
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