Xanthomonas axonopodis pv. citrumelo F1: XACM_0777
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Entry
XACM_0777 CDS
T01616
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xax
Xanthomonas axonopodis pv. citrumelo F1
Pathway
xax00470
D-Amino acid metabolism
xax00550
Peptidoglycan biosynthesis
xax01100
Metabolic pathways
xax01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xax00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XACM_0777 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XACM_0777 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
XACM_0777 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xax01011
]
XACM_0777 (ddl)
Enzymes [BR:
xax01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
XACM_0777 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
xax01011
]
Precursor biosynthesis
Amino acid ligase
XACM_0777 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
ATP-grasp
ATPgrasp_ST
RimK
Motif
Other DBs
NCBI-ProteinID:
AEO41081
LinkDB
All DBs
Position
889523..890479
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AA seq
318 aa
AA seq
DB search
MSALVGNVRTSDPAAFGRVAVLLGGTSSEREVSLNSGSNVLEALRARGVDAQPVDGIPAL
AKALVAQQFDRVFNVLHGHNGGGEDGIVQGLMEAFGVPYTGSDVLGSALSMDKIRTKQVW
LSLGLSTPRYARLAAGASAEAIHAAAQQIGLPVIVKPANEGSSVGVSRVFDQAQLEEAVT
LAARYDGALLMEQLIEGDELTVAVLGDTALPSIRIVPKGQWYDYNAKYIAEDTQYLCPGL
EGEAETQIRQLALDAFRAAGCRGWGRVDVMRDGSSGQLYLLEVNTAPGMTSHSLVPKAAR
QLGIDFEELVWRVLEQTL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgttggtcggcaacgttcgcaccagcgatccggcagcctttggacgcgtcgcc
gtactgctcggcggcacctcgtccgagcgcgaggtgtcgttgaattccggcagcaacgtg
ctggaagcgctgcgcgcgcgcggcgtcgatgcgcagccggtggatggcattccggcgttg
gccaaggcattggtcgcgcagcagttcgatcgcgtgttcaacgtgctgcacggacataac
ggcggcggcgaagacggcatcgtgcaaggcctgatggaagccttcggcgtgccctatacc
ggctcggacgtgctgggctcggcgctgagcatggacaagatccgtaccaaacaggtgtgg
ctgtcgctgggcctgtcgacgccgcgctacgcgcggttggctgctggcgccagcgcagag
gcaatccatgccgctgcacagcagatcgggttgccggtcatcgtcaagccggcaaacgaa
ggatccagcgtcggcgtcagccgcgtgttcgaccaggcgcagctcgaagaagcagtgact
ctggcggcgcgctacgacggtgcgctgttgatggagcaattgatcgaaggcgacgaactc
accgtggccgtgctcggcgacaccgcgttgccgtccatccgcatcgtgcccaagggccag
tggtacgactacaacgccaagtacatcgccgaggacacccagtacctgtgccctggcctg
gaaggcgaggccgaaacgcagattcgccaactcgcgctggacgccttccgcgctgccggc
tgccgtggctggggtcgcgtggacgtgatgcgcgatggcagcagcggccagctgtatctg
ctcgaagtgaacaccgctcccggcatgaccagccattcgctggtgcccaaggccgcccgc
cagctcggcatcgatttcgaagaactggtctggcgcgtgctggagcagacgctgtga
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