Xenorhabdus bovienii SS-2004: XBJ1_0109
Help
Entry
XBJ1_0109 CDS
T01186
Name
(GenBank) putative D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00470
D-Amino acid metabolism
xbo00550
Peptidoglycan biosynthesis
xbo01100
Metabolic pathways
xbo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XBJ1_0109
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XBJ1_0109
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
XBJ1_0109
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xbo01011
]
XBJ1_0109
Enzymes [BR:
xbo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
XBJ1_0109
Peptidoglycan biosynthesis and degradation proteins [BR:
xbo01011
]
Precursor biosynthesis
Amino acid ligase
XBJ1_0109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
RimK
dCache_1
CPSase_L_D2
ATPgrasp_Ter
Helicase_PWI
Motif
Other DBs
NCBI-ProteinID:
CBJ79260
UniProt:
D3UY82
LinkDB
All DBs
Position
complement(114884..115981)
Genome browser
AA seq
365 aa
AA seq
DB search
MVYFPSDTKTTIPLSIIFGGISPEHPASVSSFDNLIKSFRELNFDRNLNSIYFFDKDGSV
LYNAYTPYISPYDFTHSGDKIDLYTAIKRMSKQSEFHINLLHGNLGEDGHIQGVAKYFKI
KGTFGSVLPSSLSMSKYHMSHYINSLLPSLRSPKTLLLTEGNLEKAFSLISDNFPEEKIV
IKPNSLGASLFTNKYVNLENEKKSILDNLKNIFEYDRFALVQAFIKGKEYSVGCIRIEGK
AIALNVVEIITKNGFFGHDEKHRINKAEEILLIQDSEITRTLKDLSIKIFESTGYEFMCR
FDFIVTESEEIYFLESNPIPGMMKNSIFPKMLKGHKLSIPGLFIHLSCSSQNISEKKSIF
NYIIE
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggtttattttcctagcgatacaaaaacaactataccattatcgatcatttttggtgga
atttccccagaacatccagcatcagttagttcttttgataatcttataaaaagtttcaga
gagcttaattttgatagaaatcttaattcaatatacttcttcgataaagatggttctgtc
ttatacaacgcctatacaccttatatttctccctatgattttactcattctggagataaa
atagatttatatacagcaatcaaaaggatgtctaaacaaagcgaatttcacatcaatctt
cttcatggtaatttaggtgaggatgggcatatccaaggagttgctaagtattttaaaatt
aaaggaacatttggtagtgtacttccttcctcgctatctatgagtaaataccatatgtca
cactatattaatagtttattaccctctttaagatcaccgaaaacattactcttaactgaa
ggtaatctagaaaaagcattttcattgattagcgataacttccctgaagaaaaaatagtt
ataaaacctaattcattaggcgcttctttatttacaaataaatatgttaatctggaaaat
gaaaaaaaatcaatattggataatttaaaaaatatttttgaatacgatagatttgccttg
gtacaagctttcatcaaaggaaaagagtattctgttggttgcattcgaatagaagggaaa
gcaatagcactcaatgttgtcgaaataatcacaaagaatggttttttcggtcatgatgaa
aagcatcgaattaataaagcagaagaaattcttttaatacaagattcagagataacgaga
acactaaaagatttatctattaaaatttttgaatctactggatatgaatttatgtgtcga
tttgactttattgttaccgagtctgaagaaatatactttcttgaatcaaatccaattccg
ggcatgatgaaaaatagcatattccctaagatgttaaaaggacacaaattatcaatacct
ggcttgtttattcacctatcatgttcatcacaaaacatttctgaaaaaaaatctattttt
aactacattatcgagtaa
DBGET
integrated database retrieval system
