Xenorhabdus bovienii SS-2004: XBJ1_3549
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Entry
XBJ1_3549 CDS
T01186
Symbol
prfC
Name
(GenBank) putative peptide chain release factor RF-3; GTP-binding factor
KO
K02837
peptide chain release factor 3
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
xbo03012
]
XBJ1_3549 (prfC)
Translation factors [BR:
xbo03012
]
Prokaryotic type
Release factors
XBJ1_3549 (prfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
RF3_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
Ras
Roc
Motif
Other DBs
NCBI-ProteinID:
CBJ82667
UniProt:
D3V4T8
LinkDB
All DBs
Position
complement(3460543..3462132)
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AA seq
529 aa
AA seq
DB search
MSNFPFQQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQKAGTVKGRGSNQHAKSDWM
EMEKQRGISITTSVMQFPYDDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVE
DRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMEVMDEVENELKIACSPITWPIGCGKSFK
GVYHLYLDEIYLYQSGQGHTIQEVRAIKGLNNPELDAAVGEELADQLREELELVKGASHE
FDQEAFLQGELTPVFFGTALGNFGVDHMLDGLVKWAPMPMSRLTDAREVTAEEEKFTGFV
FKIQANMDPKHRDRVAFLRVVSGKYEKGMKLRQVRIKKDVVISDALTFMAGDRSHIDHAY
AGDIIGLHNHGTIQIGDTFTQGEELKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLS
EEGAVQVFRPLANNDLIVGAVGVLQFDVVVARLKSEYNVEALYESVNVSTARWVECNDAK
KVEEFKRKNELNLALDGGDNLTYIAPTMVNLNLTSERYPEISFRKTREH
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattttccattccagcaggaagtcgcgaaacggcgaacctttgcaataatttct
caccccgatgcggggaaaactaccattactgaaaaagtgttactgttcggacaggcgatc
cagaaagcggggacggtaaaaggccgcggctctaaccagcacgctaaatcagactggatg
gagatggaaaaacagcgtggtatctccattaccacttctgtgatgcagtttccttatgat
gattgtctggttaacttactggatactccgggacacgaagacttctccgaagatacttac
cgtactctgacggcggttgactgctgtctgatggtcattgatgccgcaaaaggtgttgag
gatcgtacccgtaagctgatggaagtcacccgtctgcgtgacactccaatcctgacattc
atgaataaactcgaccgcgatatccgtgatccgatggaagtgatggatgaagtggaaaat
gagttgaaaatcgcctgtagcccgattacatggccaatcggctgtggtaaatccttcaag
ggggtttatcatctttaccttgatgaaatttacctgtatcaatccggtcaagggcatacc
attcaggaagtccgtgccattaaaggattgaataaccctgagctggatgcggctgttggg
gaagaattggcggatcaattacgtgaagagctggaactggtcaaaggggcatcacatgag
tttgatcaggaagcctttttacagggtgagctaacaccggtgtttttcggtacagcgctg
ggtaacttcggcgttgaccatatgctggatggccttgtcaaatgggcgccaatgccaatg
tctcgtctgactgatgcgcgtgaagtgacagcagaggaagaaaaattcacgggttttgtt
ttcaaaattcaggctaacatggatccgaaacaccgtgaccgcgtggcatttctgcgtgtt
gtttccggtaaatatgaaaagggtatgaaactgcgtcaagtccgcatcaagaaagacgtt
gtcatttcagatgcactgaccttcatggcaggagatcgctctcatatcgatcatgcttat
gcgggggatattatcggcttacataatcatggcacgatccagattggtgatacctttact
cagggagaagaactgaaatttaccggtattcctaactttgcgccagaattgttccgtcgt
atccggctgcgtgaccccctgaaacaaaaacaattgctgaaaggtctggttcagttatcg
gaagagggggcagtacaggtatttcgtcctctggctaataacgatctgatcgttggggcg
gtgggtgtgcttcagtttgacgtcgttgttgcccgtttgaaaagcgaatataacgttgaa
gcattgtatgaatccgtcaatgtttccaccgctcgctgggtagagtgcaacgatgcgaag
aaagtggaagagttcaagcgcaagaatgaattgaacttggcactcgatggtggtgataac
ttaacttatattgcaccaacaatggttaatttaaatctaaccagcgaacgttatccagaa
atttctttccgtaaaacccgcgaacactaa
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