Xanthomonas campestris pv. campestris ATCC 33913: XCC0222
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Entry
XCC0222 CDS
T00083
Symbol
ddlB
Name
(GenBank) D-alanine-D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc00470
D-Amino acid metabolism
xcc00550
Peptidoglycan biosynthesis
xcc01100
Metabolic pathways
xcc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XCC0222 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XCC0222 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
XCC0222 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xcc01011
]
XCC0222 (ddlB)
Enzymes [BR:
xcc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
XCC0222 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
xcc01011
]
Precursor biosynthesis
Amino acid ligase
XCC0222 (ddlB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
GARS_A
RimK
Motif
Other DBs
NCBI-ProteinID:
AAM39541
UniProt:
Q8PDW3
LinkDB
All DBs
Position
complement(279064..280185)
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AA seq
373 aa
AA seq
DB search
MTGAGMRRIRVGLIFGGKSAEHEVSLQSARNILQALDPQRFEPVLIGIDKQGQWHLSAQE
SFLLDADDPSRIALRHSGRGLAVLPGAASAQLRAVDAEQALAQIDVVFPIVHGTLGEDGS
LQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDAGLEVAPFACFTRHTAAQADVQTLI
AQFGLPLFVKPANQGSSVGVSQVRSAEEFSAALELALRYDHKVLVEAAIAGREIECAVLG
NATPQASVCGEVVVHDAFYSYQTKYIRDDGAATVIPADIDAHTQHRIQQCALQAYQALDC
AGMARVDVFLCADGRIVINEVNTLPGFTRISMYPKLWEASGLDYRSLVTRLIELALERHA
DDGRLYSSVVTHA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagcaggcatgcgcaggattcgggtcggactcatctttggcggcaagtcggcc
gagcacgaggtctcgctgcaatcggcgcgcaatatcctgcaggcgctggacccgcagcgg
ttcgagccggtgctgatcggcatcgacaaacagggccagtggcacctcagcgcacaagag
agtttcctgctcgatgccgacgaccccagccgcattgcgctgcgccacagcggccgcggg
ctggccgtgctgcccggtgccgccagtgcgcagctgcgcgcggtggatgccgaacaggcg
ttggcgcagatcgatgtggtgttcccgatcgtgcacggcacgctgggcgaagacggctcg
ctgcaggggctgctgcgcatggccaacctgccgttcgtcggttccggcgtgctggggtcg
gccgtggcgatggacaaggacatggccaagcgggtgctgcgcgatgccggcctggaggtg
gcgccgttcgcatgcttcacgcgccacaccgctgcgcaggccgacgtgcagacgctgatt
gcccaattcgggctgccgttgttcgtcaagccggccaaccagggctcgtcggtcggcgtc
agccaggtccgcagcgctgaggagttcagcgctgcattggagctcgcgctgcgctacgac
cacaaggtgctggtggaagcggcgatcgccgggcgcgagatcgaatgcgcggtgctgggc
aatgccacgccgcaggccagcgtgtgcggcgaggtggtggtgcacgacgcgttctattcg
taccagaccaagtacatccgcgacgatggcgcagcgacggtgattcccgccgatatcgat
gcccacacccagcaccgtatccagcagtgcgcactacaggcctatcaggcgctggactgc
gccggcatggcgcgcgtggatgtgttcctgtgcgcggatgggcgcatcgtcatcaacgag
gtcaacaccttgcccggcttcacccgcatcagcatgtatcccaagttgtgggaggcaagc
gggctggactatcgcagcctggttacgcgcttgatcgagctggcactggagcggcatgcc
gacgatgggcgcctgtacagcagcgtggtcacgcacgcgtga
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