Xanthomonas campestris pv. campestris ATCC 33913: XCC2336
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Entry
XCC2336 CDS
T00083
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Pathway
xcc00250
Alanine, aspartate and glutamate metabolism
xcc00310
Lysine degradation
xcc00350
Tyrosine metabolism
xcc00650
Butanoate metabolism
xcc00760
Nicotinate and nicotinamide metabolism
xcc01100
Metabolic pathways
xcc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
XCC2336 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
XCC2336 (gabD)
00310 Lysine degradation
XCC2336 (gabD)
00350 Tyrosine metabolism
XCC2336 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
XCC2336 (gabD)
Enzymes [BR:
xcc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
XCC2336 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
XCC2336 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
XCC2336 (gabD)
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Motif
Pfam:
Aldedh
LuxC
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
AAM41614
UniProt:
Q8P8A7
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All DBs
Position
complement(2744899..2746263)
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AA seq
454 aa
AA seq
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MSYDTVNPANGQVEHTQHTLDAAAIEARLAASAKAFPEWAALPLAERGALLRRVGEELTK
RREDLQRIMTAEMGKLRREALAEIDKCAQGCAYYAEHAAEYLAPRAIPTEAQSSYVRYEP
LGCVFAVMPWNFPLWQAFRFLAPGLMAGNVALLKHASNVPRCADAMKEVLDAAGIPPGVF
DVLHIDNDQAAEVLRDDRIAAVTLTGSERAGRSLAANAGDQLKKCVMELGGSDAFVVLDD
ADLERTVQSAVQSRFDNSGQTCIAAKRFIVVDAIADQFVERFVAAAAQRVLGDPQQDATT
LAPMARADLRDELHKQVQESVSKGAKVLLGGEPVAGSHAGYPATILDQVGPGMPAYEQEL
FGPVAAVIRVADEAEAVRVANDTTFGLGGSVWTADAKRGERVAQQLQCGAAFVNSVVKSD
VRLPFGGIKRSGFGRELAEHGIHEFMNIKTIYVA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacgacaccgtcaatccggccaatggccaggtcgaacatacccagcacacgctg
gacgccgccgccatcgaggcgcgtctggctgcttccgccaaggcgtttccggagtgggca
gcgctgccactggccgagcgcggcgccttgttgcggcgggtgggcgaggagctgaccaag
cggcgcgaggacctgcagcgcatcatgacggcggagatgggcaagctgcgtcgcgaagct
ctggccgagatcgataaatgcgcacagggctgcgcctattacgccgagcatgcggccgag
tacctggcgccacgcgccattccaaccgaggcgcagtccagctatgtgcgctatgaaccg
ctgggctgcgtgtttgcggtgatgccgtggaatttcccgctgtggcaggcgtttcgcttt
ctcgcgccgggcctgatggccggcaatgtcgcgctgctcaaacacgccagcaacgtgccg
cgttgcgccgatgcgatgaaggaggtgctagacgccgccggcattccgccgggtgtgttc
gacgtgctgcatatcgacaacgatcaggccgccgaggtgttgcgcgatgaccgcattgcg
gcagtcacgctcaccggcagcgaacgtgccggccgctcgctggccgctaatgcaggcgat
caactgaaaaagtgcgtgatggaactgggcggcagcgatgccttcgtggtgctcgacgat
gcggatctggagcgcaccgtgcagtcggcagtgcagtcgcgcttcgacaacagcgggcag
acctgcattgccgccaagcgctttatcgtggtggatgccattgccgaccagttcgtggag
cgcttcgttgccgccgccgcgcagcgtgtgctcggcgacccgcagcaggacgcgaccaca
cttgcgccgatggcgcgtgcggacctgcgcgatgaattgcacaagcaggtgcaggaaagc
gtgtccaagggtgccaaggtgttgcttggcggcgagccggtggcggggtcgcatgcgggt
tacccggccaccattctcgaccaggtcggcccaggcatgccggcctacgagcaggaattg
ttcgggccggtcgcggcggtgattcgcgttgccgatgaggccgaagcggtgcgcgtggcc
aatgacaccaccttcggtttgggcggcagcgtgtggaccgccgatgccaagcgaggtgag
cgcgttgcgcagcagttgcagtgcggtgcggcgttcgtgaattcggtggtgaagagcgat
gtacggttgccgttcggtgggatcaagcgctcgggattcgggcgggaattggccgagcac
gggatccatgagttcatgaatatcaaaacgatttatgtggcttga
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