Xanthomonas citri subsp. citri Aw12879: XCAW_01411
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Entry
XCAW_01411 CDS
T02519
Symbol
ispA
Name
(GenBank) Geranylgeranyl pyrophosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Pathway
xci00900
Terpenoid backbone biosynthesis
xci01100
Metabolic pathways
xci01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
XCAW_01411 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
xci01006
]
XCAW_01411 (ispA)
Enzymes [BR:
xci01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
XCAW_01411 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
XCAW_01411 (ispA)
Prenyltransferases [BR:
xci01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
XCAW_01411 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AGI07213
LinkDB
All DBs
Position
complement(1591288..1592151)
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AA seq
287 aa
AA seq
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MFDHWIARTERSLEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQ
LDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELL
AAASASAELRVGWMQSLATAAGAAGMCGGQALDIDATGQLQSLQHLQRMHALKTGALIRA
AVRMGALTGGAALADQQRLDEFADALGLAFQVRDDILDVESSSAQLGKTAGKDAAQSKST
YPALLGMDGAKAKLAELAARMHDVLQPYGQPGETLATLARFAVNRAH
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgaccactggatcgcccgcaccgaacgcagcctggaggccggcttgccgagcgcc
acgcatgcgccgcagcgcctgcatgcagcgatgcgccacgccgtgctgggcgggggcaag
cgcatgcggccgctgctggtctacgcaagcggcgcattgttcggtgccgctgaggatcaa
ctcgacacgcccgcggtggcagtagagctgattcacgcttattcgctggtgcacgacgat
ttgccggcgatggacgacgacgcgctgcgacgcggccagcccaccgtgcatatcgccttc
gacgaggccaccgcgattctggccggcgatgccttgcagacgcgcgcgttcgaattactc
gccgctgcctctgccagcgccgaactgcgcgtgggctggatgcagagcctggccaccgcg
gcgggcgcggccggcatgtgcggcggccaggcgctggacatcgatgcgaccgggcaactg
caatcgctgcagcacctgcagcgcatgcatgcgctcaagaccggcgcgttgatccgcgca
gcggtacggatgggcgcactgaccggaggcgcagcgttggccgaccagcagcgcctggac
gaatttgccgacgcgctgggcctggccttccaggtgcgcgacgacatcctggatgtggaa
tcgagctcggcgcagctgggcaagaccgccggcaaggacgcggcgcaatccaaatccacc
taccccgccctgctggggatggacggcgccaaggcgaagctggccgaactggccgcgcgc
atgcatgacgtcctgcagccctacgggcaaccaggcgagacattagccaccttggcccgg
tttgcggtgaaccgcgcgcactag
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