Xiphophorus couchianus (Monterrey platyfish): 114134366
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Entry
114134366 CDS
T05908
Name
(RefSeq) ras and Rab interactor 3-like isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114134366
Membrane trafficking [BR:
xco04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
114134366
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Gene cluster
GFIT
Motif
Pfam:
VPS9
7TMR-HDED
EcsC
WASH-7_mid
Motif
Other DBs
NCBI-GeneID:
114134366
NCBI-ProteinID:
XP_027856745
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All DBs
Position
19:complement(24209571..24217884)
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AA seq
986 aa
AA seq
DB search
MEASGVPQDTGHSGPLSRSSCSSSLPPARPGRPPPPPLLLRPSQLPVPLFSPLPSPLSPI
VLSSSPPLDSTSDPALAPPSRPFLLSSLDRVLGSVSVWQPRGLSPDTASRFLENQPAGTF
PLTFPDVLQTFLAHTAADRVTMISVRLPDEGGAPAVRGVAVQQLHAFVHLEGSSLLFDDI
FKLISFYCTSRDILAMPLKLPLSVAVATREEDLEVLSALGADFWMSDLNQRPQNPDRTDQ
PNTYLYVNPVPVEGPSSERKSSISKPESFLSEAVTPSLQNGEMSKKLPPRVKVPKRPPPR
PPSLTSGLLSSPLSPPATSSDTPESDRKEEGRAVSEKEGRKSTSPPPPRPTAPQLPQGPV
PPAPQLPQGPVPPAPLQCTSGCQLPAKEDGQNLAKNTEGEKRKEKWGSRAGLLGEEVEQE
EAVKRKAQEEQELKLGKEDMLKTNSTSSLAIKKPSRPVPPPRTKPSFANSAGGSNQAAGG
PTDQSAGMKVPPPSPPQRPDVSLYSPQGGAALAADLDSCSISSTEEEGELNQEQDANPRV
HADRSCTKGAVRRTPTIMLDRARLRLSTVLTGLIYHDGRLTKRIIELARDPVSYFGNLVK
DHRAFTLETMSKHTTSTELLQEIRQMMTQLKSYLLQSTELQALLEPQHQYTQDKLESLVE
AALCKSVLKPLKEPIYRSLERLHTESRRQLEKNQAVVLASTTTALGICTSIPEVAAMERI
SLKLNKLHQEYSPQRKIQLLLKACRLIYHSMSISCPGRAHGADDFLPVMMYVLARSNMTA
LQLDVEYMMELMDPALTQGEGSYYLTTTYGALEHIKTFDQQRSATRQLSREVQDSIHRWE
RRRTLNQERDGHNSVRDFLTVFSPEIGVNPKTLGVLPTTSIQELTDQCAARYEQAGFTLS
VFVDGVLQPVAPTDRALNVKNRCQPGAYCFLYHPPDRPGTLQVRPDRPDPPQVRTCPSAP
PPPLPGEDFQIVSPGKPEEEEALIDL
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagcggagttccccaggacacaggccacagcggccccctcagccgttcatcc
tgctcttcctcccttccccccgccaggccgggtcggcccccgcccccgcccctcctcttg
agaccctcccagctcccagtgcccctcttttctcctcttccttctcctctctctcccatt
gtcctctcctcctctcctcccctcgactcgacctctgaccctgccctagcccctccctcc
cgtccgtttctgctcagctctttggaccgggtgctggggagcgtctcggtgtggcaaccc
agaggtctgagtcccgacaccgcctccagattcctggagaaccagccagcagggacgttc
cctctaacgttccctgatgttctgcagacgttcctggctcacactgcagcagatcgggtc
accatgatctcggtccggctgcctgatgaaggcggtgctccggcggtacgcggcgtggcg
gtccaacagcttcacgcctttgttcacctggagggatcctcgctgctctttgatgacatc
ttcaagctgatctccttctactgcaccagcagagatattcttgcgatgccattgaagtta
cctctgtctgttgccgtggcaaccagggaagaggacctggaggtcctttctgctttgggt
gcagatttctggatgtctgacctgaaccagaggcctcagaacccggaccggaccgatcag
cccaacacctacctgtatgtcaacccagtgcctgtggaggggcccagttcagaaagaaaa
tcctccatctccaaaccagagtccttcctcagtgaagcagttaccccctccctgcagaat
ggagaaatgtcaaagaaattacctccacgagtcaaagttcccaaacggccgcccccccgg
ccccctagcctgacttcaggccttctctcctctcctctctcacctccagctacgtcttct
gatactccagaatctgacagaaaagaggaaggaagagcagtgagtgagaaagaagggagg
aagtcaacatcgcctccaccgccgagacctaccgccccccagctgccccaggggccagta
cctcctgccccccagctgccccaggggccagtgcctcctgcccccctccagtgtacctca
ggatgccagctgccagccaaggaagacggacaaaatcttgcaaagaacactgagggagaa
aagaggaaggagaaatggggaagtagggcaggtctgctgggcgaggaggttgaacaggag
gaggcggtgaaaaggaaagcgcaggaggaacaagagctgaagctggggaaggaggacatg
ctaaagaccaactccacatcttctctggcaataaagaagccgtctcgcccggtcccgcct
ccaaggactaagccgtccttcgccaactcagctgggggctccaaccaggcagctggagga
ccaaccgatcagagcgcagggatgaaagttccccctccctcaccgcctcagcgcccagat
gtgtccctgtattcaccacaggggggtgctgctctggcagctgacctcgattcctgctca
atcagcagcacagaggaagagggagagcttaaccaggagcaggacgcaaaccccagggtt
catgcagaccgaagctgcaccaaaggagccgtcaggagaaccccgaccatcatgttggac
cgagcccgcctccgcctctctaccgtccttactggactcatctaccatgacggccgcctc
accaagcgcatcattgagttggccagagaccctgttagctactttggtaacctggtcaag
gaccacagagctttcaccctggagacgatgtccaagcatacgacgtccacagagcttctg
caggagatcagacagatgatgacccagctgaagagttacctcctgcagagcacagagctg
caggctctgctggagcctcagcatcagtacacgcaagacaagctggagagcctggtggaa
gcagctctgtgtaagagcgtcctgaagccgctgaaggagccgatctaccggagcctggag
aggctgcacaccgagagccggaggcagctggagaagaaccaggccgtggtcctggccagc
accaccacagcgttggggatctgcacctccatcccggaggtggcagcaatggagcggatc
agcctgaagctgaacaagctgcaccaggagtattccccccaaaggaagatccagctgctg
ctgaaggcctgcaggctcatctaccactccatgtccatcagctgcccaggccgggcccac
ggcgccgacgacttcctgcctgtgatgatgtatgtcctggcccggtccaacatgaccgcc
ctgcagctggacgtggaatacatgatggagctgatggacccggcgctcacccagggcgaa
ggttcctactacctgaccaccacctacggcgcgctggagcacatcaagacgtttgaccag
cagagatcagcgacgcgacagctgagcagagaggtccaggactccatccaccgctgggaa
agacggcggaccctcaaccaggagcgggacggccacaactctgttcgggacttcctgact
gtgtttagtcctgagatcggcgtcaacccgaaaactctgggcgtcctccctacaaccagc
atccaggaactgaccgatcagtgcgctgcacgctatgagcaagccggcttcacgctgagt
gtctttgtggatggagtcctgcagcccgtcgctcctacagaccgggccctgaacgtcaag
aaccgctgccagcccggagcctactgcttcctctaccacccccccgaccgacccggcacc
ctccaggtccgacccgaccggcccgaccccccccaggtccggacctgtccctctgcccca
cctcctcctctgcctggtgaggacttccaaatcgtcagtcctgggaaaccggaggaggag
gaagccctgattgacctttaa
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