Xiphophorus couchianus (Monterrey platyfish): 114135169
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Entry
114135169 CDS
T05908
Symbol
eif4b
Name
(RefSeq) eukaryotic translation initiation factor 4B isoform X1
KO
K03258
translation initiation factor 4B
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
114135169 (eif4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114135169 (eif4b)
03012 Translation factors [BR:
xco03012
]
114135169 (eif4b)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114135169 (eif4b)
mRNA cycle factors
Stress granule specific factors
114135169 (eif4b)
Translation factors [BR:
xco03012
]
Eukaryotic type
Initiation factors
eIF-4
114135169 (eif4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
114135169
NCBI-ProteinID:
XP_027857975
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Position
20:complement(21789589..21804229)
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AA seq
647 aa
AA seq
DB search
MKATTGVLILSTKKKNKKGKTLTLNDFLAEDGGGGTPAPSYPSKSTSWADETDDLDGDVA
TSWHTEEDTYRAPPIDRSILPTAPRSAREPNIDRARLPRSPPYTAFLGNLPYDVTEDSIK
DFFRGLAISAVRLPREPSNPERLKGFGYAEFDDLESLLQALSLNEENLGNRRIRVDIADQ
SNDKERDSGSMGGRDRGGRMADMGPDKTDSDWRARPSADNDDGPPRRDDAFGERSRDRYE
SDRYREGSRRDDRYDGGRDRYRDRYDDRDRRDRYDDRDRRDYDRGGFDSRGGGGGRRAFG
SSFRRDYEDGRGSNDRFGDRDRYGDREDRYDRRDDRREERAPQQRPKLNLKPRSVPKEEE
GNSSGGTSPAAPPSSGGRSSSIFGGAKPVDTAAKEREVEERLKKEEERLQRQLEVDKSRV
PERKMRDRDPSWRNEETQSERSRTESESSQPGSTSGRGSRCLDGERSGENEVFSGREGNS
SPGSSPRPTSTGSSKEPLKVMPAPLPKENAWAKRSAVSTGSNEGEGRPPVSPVSPSGSAP
PKFSSPSSGDERGPGKDENKADGVRRDRGAPRTRGGPAGPGAGRGRGEVPNKDRKKEADR
KDNKRDSRPPPEPKKYEETPTPKFSSASKYAALLMDGDQGDDTEDVE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaacaactggtgtgcttatactttccactaagaagaagaataagaagggaaag
accctgactctgaatgacttcctggcagaagacggtggaggcggtactcctgctcctagc
tacccatccaagtccacgagctgggctgatgagaccgacgacctggacggagatgttgcc
acatcttggcacactgaggaggatacgtaccgggccccacccattgaccggtccatcctg
cccacggctcctcgctcggcacgtgagcccaacatcgaccgcgccaggctgcctcgcagc
ccaccgtacaccgccttcctgggaaacctgccctacgatgtcacagaggactcgataaaa
gacttctttcgcggcttggcgatcagcgcagtacgtctgcctcgagagcccagtaaccca
gagaggctgaaaggttttggatatgctgagtttgatgacctggagtccctcctgcaggcc
ctcagtctgaatgaagagaacttggggaaccggaggattcgtgtcgacattgcagaccag
tcaaatgataaagaacgagacagtggatccatgggaggcagagacaggggtggacgaatg
gcagacatgggtcccgacaagacagacagcgactggagagctaggccaagtgccgacaac
gatgatggacctccacggagggatgatgcttttggcgaaagatcacgggaccggtatgag
tcagaccgttacagagaggggtcacgacgggacgatcgctatgatggaggaagagaccgc
tatcgtgatcgctatgacgacagagaccgcagggaccgctatgacgacagggaccgcaga
gactatgatagaggaggtttcgactcccgtggtggtggaggaggtcgtcgtgcctttgga
agcagcttccgtcgagattatgaagatggtcgaggtagcaatgatcgtttcggtgacagg
gatcgttatggcgaccgggaggaccggtacgatagacgagatgacaggcgcgaggagaga
gctcctcagcaaagacccaagttaaacctgaagccccgcagcgtaccgaaagaggaggag
ggtaacagcagcggaggcacatcccctgctgcccctccgagctctggaggcaggtcctca
tccatattcggtggggcaaaaccagttgacacggcagccaaggagagggaggtggaagag
aggctgaaaaaagaagaggagaggctgcaaagacaactagaggtggacaaaagccgagta
cctgaaaggaagatgagagacagggaccccagctggcgcaacgaggaaactcaatctgag
cgatctcgcacagaaagtgagtcttcgcagccaggaagcacctctgggagagggtcgagg
tgtctagatggcgagcgctctggggagaatgaggttttctctgggagagaaggaaactcc
tcccccggctcctcgccgcggccgacctccaccggctcctcaaaggagccgctgaaagtg
atgccggcccctcttcccaaggagaacgcttgggccaaaagaagtgctgtgagcacaggc
tccaacgagggagaaggtcggcccccggtctctcccgtctctccgagcggttcggctccc
ccaaagttcagctcgccaagttctggagatgaaagagggcctggaaaagatgagaacaag
gctgatggtgtgcgtcgggaccgaggggccccacggacacgaggggggcctgcagggcct
ggagctgggcggggccgaggagaggtgcccaacaaagacagaaaaaaggaggcagacaga
aaggacaacaaaagagactccagaccccctccagagccaaagaaatacgaggaaacccca
acccccaagttcagctcagccagcaaatacgccgctttgctaatggacggagaccaagga
gacgacaccgaggacgtcgagtag
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