Xiphophorus couchianus (Monterrey platyfish): 114138261
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Entry
114138261 CDS
T05908
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03460
Fanconi anemia pathway
xco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114138261 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
114138261 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114138261 (fancl)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114138261 (fancl)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114138261 (fancl)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114138261 (fancl)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
114138261 (fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_d2
FANCL_d1
FANCL_C
zf-RING_2
Tymo_45kd_70kd
SLX1_C
zf-rbx1
DUF2286
Motif
Other DBs
NCBI-GeneID:
114138261
NCBI-ProteinID:
XP_027863217
LinkDB
All DBs
Position
22:complement(19400448..19423775)
Genome browser
AA seq
410 aa
AA seq
DB search
MESLLIRDNPLLLPLNKKKTVYDGFITVQERDFRIRILLPPDLQLKRARLHCCWQLKHLL
REYEHIVKQRLQQSVDLGGFILELKTVLEVALNRCPEGRSVPPPRYYSQLISEMETVGWD
KMLFIDMDFQTLKLRAEDSSGRQHTLTVKLKSKHPAEAPDCSADLPVPLTITWTPQSTLE
QLHSQFLLVLESLTDFWDVLDEIDRKTWVLEPEKPSRSDTMRRIAIGNNVSIKVEVDPRH
PKMLPECCLLGADHVVTPLRNKLNANMHMWNPDSSVLNNLRDVLEIEFPSPATHEKSSFN
VECGICYSYRLEDAIPDQVCNDPRCGQPFHQACLYEWLRALPSSRQSFNLVFGECPYCSK
VCGRRQPTQRPGLSAAYIFSSYSYGSIHHLALSSQSAFTRSLVARTESEF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggagagcttattaatacgcgataacccgctgcttttacctctcaacaagaagaaaaca
gtctatgatgggtttataaccgtacaggaaagagacttcagaataagaatactcctccct
ccagatctccaactgaagcgggccaggctgcactgctgttggcagctgaaacacctgttg
cgtgaatatgagcacatagtgaagcagaggctgcagcagtcggtggatcttggcggtttc
attctggagttgaaaaccgtcttggaagtggctctaaatcgatgtcctgagggtcgctcc
gtcccgcctcctcgatattactcccagctcatatctgagatggagactgtcggatgggat
aagatgcttttcatagacatggacttccaaacactgaagctgagggcagaggactcctct
ggaaggcagcacactctcactgttaaactcaagtcaaagcatccagcagaggctcctgac
tgttcagctgacctgccagtccctttgaccatcacctggacaccacagagtactctagag
cagctccacagccagttcctgctggttctggagtccctgacggacttctgggacgtcctg
gatgagatcgacaggaagacctgggttctagagccggagaaacccagccgttccgacacg
atgaggcggatcgccataggaaacaacgtctccatcaaggtagaggtggatccgcgacac
ccgaagatgctgccagagtgctgcctgctgggagccgatcatgtggtgactccgctgagg
aataaactgaacgccaacatgcacatgtggaacccggactccagcgtcttgaacaacctc
cgggatgttttggagatcgaattcccgtcaccggccacccacgaaaaatctagtttcaat
gtggagtgtggcatctgttactcctatcggcttgaagacgccatcccagatcaagtgtgt
aatgacccccgctgtggccagccgttccatcaggcctgtctctatgagtggctgagagcg
ctcccctccagcaggcagagcttcaaccttgtttttggagagtgtccttactgcagtaag
gtatgtggacgcaggcagccgacacaaaggcctggcctcagcgccgcatacatattcagt
agctactcatatggatccattcatcatctggccttgtcttctcaaagtgccttcacacgc
agtttagtagctagaactgagtcagagttctag
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