KEGG   Xiphophorus couchianus (Monterrey platyfish): 114140844
Entry
114140844         CDS       T05908                                 
Name
(RefSeq) histone deacetylase 4-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:xco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    114140844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xco03036]
    114140844
Enzymes [BR:xco01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     114140844
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     114140844
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln fn1
Other DBs
NCBI-GeneID: 114140844
NCBI-ProteinID: XP_027866904
LinkDB
Position
24:complement(1167197..1229820)
AA seq 1103 aa
MLRTIFEAECSLSPTEGILGKEQSLEVLKTSALNHIPTVDINSALPLRLPPAAIPMDLRV
DHHHQQQQQVSSLSPPGQLSPSSLGGSGGGGGGVVAASVREQQLQQELLALKQKQQIQRQ
ILIAEFQRQHEQLSRQHEAQLQEHIKQQQELLALKHQQELLEHQRKMENHRLEQELEKQQ
REQKLQLLKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRSLNQGSLPNDAPYWYRKT
QHSSLDQSSPPQTAVSTYNHPVLGVYNPRDDFPLRKTASEPNLKLRSRLKQKVSERRSSP
LLRRRDSPITTAKKRSLDMADSACSSAPGSGPSSPNNSSNNIPNENGITVSISNNMEASL
AQRLCGGGDQGSINQLSLYTSPSLPNITLGLPATATATAASNVTSAQDAGLQPALSLSPP
FLSGGHLSPYLADSGSGGHGAHSPLLQHMVLMEQSPAQSPLVTGVSGMSMSSASMAKLQR
QHRPLGRTQSAPLPQGSAAQAHAQALALQQLVVQQQHQQFLEKHKQQFQQQQLHLNKMMG
KPGESPVGRQHQSHPEETEEELREHQDAGALPPGVTIKQEPPDPQELQELQELQEEALQQ
HREREQELLFRQQALLLEQQRIHQLRNYQASMEAAGMSMSFPGHRPLSRAQSSPASASSF
PISVPTQDPPVKPRFTTGLVYDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETGLRAQ
CECIRGRKAALEELQTVHSEAHVLLYGTNPLRQKLDCSITPMFVRLPCGGVGVDSDTIWN
EVHSSSAARLAVGSVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAK
LLQQRLSVSKILIVDWDVHHGNGTQQAFYDDPNVLYMSIHRYDDGNFFPGSGAPDEVGSG
PGVGFNVNVAFTGGLDPPMGDSEYLTAFRSVVMPIADEFAPDIVLVSSGFDAVEGHPPPL
GGYTLTSKCFGYLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVAALLGQELDPLPKA
VLEQRPNPNAVRSLEKVIETHSKYWRSVHRYSSRLGLSLLEAKRGDSEEAEAVSAMASLS
VANTNTMDQSRTEEEPMEEEAPL
NT seq 3312 nt   +upstreamnt  +downstreamnt
atgctgcggaccatatttgaagcagaatgttctctttctcccacagagggaatcctgggg
aaggagcagtcgctcgaggtcctcaagacgtcggcgctcaaccacatcccaacagtggac
attaactctgcgctgcccctgcgtctgccccctgctgccatccccatggacctgcgcgtt
gatcaccaccaccagcagcagcagcaggtgtcgtcgctctccccgccaggccagctctcc
cccagctccctgggaggatcgggtggcggtggcggcggtgtggtggcggcctcggtgcgc
gagcagcagctgcagcaggagctgctggctctgaagcagaagcagcagatccagaggcag
atcctgatcgccgagttccagcggcagcacgagcagctgtcccgccagcatgaggcccag
ctccaggagcacattaagcagcaacaggagctgctggccctgaagcaccagcaggagctg
ctggagcaccagaggaagatggagaaccaccggctggagcaggagctggagaagcagcag
agggagcagaagctgcagctgctgaagaacaaggagcggggccaggagagtgctgtggcc
agcaccgaggtgaagatgcgtctgcaggagttcgtcctgaacaagaagaaggcgctggcc
cagcggagcctcaaccagggtagcctccccaacgacgccccctactggtaccgaaaaacc
caacatagctctctggaccagagctcgcctccacaaaccgcagtgtccacctacaatcac
ccggtgctgggcgtctacaaccctcgggatgacttcccactgcgaaagaccgcctcggag
cccaacctgaagctgcgctcccggctgaagcagaaagtgagcgagcgccgcagcagcccg
ctgctccgccgcagagacagtcccatcactacggccaagaagcgctccctcgacatggcg
gactcggcatgcagcagcgcccccggctccggccccagctccccgaacaacagctccaac
aacatccccaacgagaacggcatcactgtgtccatctccaacaacatggaggcgtctctg
gcccagcggctgtgcggcggcggcgatcagggctccatcaaccagctgtctctctacacc
tcgccatccctccccaacatcaccctggggctgccggccactgccaccgccaccgccgcc
tccaacgtgacttccgctcaggatgcaggcctgcaaccagccctctccctcagccccccc
tttctgtctggtggccatttgagcccctaccttgcagatagcgggtccggcggccacggc
gctcacagccccctgctgcagcacatggttctgatggagcagagtcccgctcagagcccg
ctggtgacaggcgtaagcggcatgtccatgtcatcggcctccatggccaagctgcagcgg
cagcaccggcccctggggcggacccagtcggcgccgctgccccaggggagcgccgcccag
gcccacgctcaggccctggccctgcagcagctggtggtgcagcagcagcaccagcagttc
ctggagaagcacaagcagcagttccagcagcagcagctccacctcaacaagatgatgggg
aagccgggcgagtcgcccgtggggcggcagcaccagagccacccggaggagacggaggag
gagctgagggagcaccaggacgccggggccttgccaccgggggtcaccatcaagcaggag
ccgccggacccacaggagctgcaagagctgcaagagctgcaggaggaggcactgcagcag
caccgcgagcgggagcaggagctgctcttcagacagcaggctctgctgttggagcagcag
cggatccaccagctgaggaactaccaggcgtccatggaggctgccggcatgtccatgtcc
ttccctggacacagacccctgtccagggcgcagtcgtctccggcctcggcgtcgtccttc
cccatcagcgtccccacgcaggatcctcccgtcaagcctcgcttcaccacaggcctggtg
tatgactccctgatgcagaagcaccagtgcatgtgtggaaacaccaacagccacccggag
cacgccgggcgcatccagagcatctggtcccggctgcaggagaccggactccgagctcag
tgcgagtgtatccgtgggaggaaggccgctctggaggagctgcagacggtccactctgaa
gcccacgtcctgctgtacggaaccaacccactccggcagaaactcgactgttccataacg
cccatgttcgttcggctgccgtgcggaggagtgggggtggacagcgacaccatctggaac
gaggtccactcgtccagcgcggctcggctcgccgtcggctccgtcgtggagctggtcttc
aaggtggcaaccggagagctaaagaacggttttgcggtggtccgccctcctggacaccac
gccgaggaaagcacccccatgggcttctgctacttcaactcggtggccatcgcggccaaa
ctgctgcagcagagactcagcgtcagtaagatcctcatcgtggactgggatgttcaccat
ggcaatggcacccagcaggccttctacgacgaccctaatgtcctctacatgtctatccat
cgctacgacgacggcaacttttttccaggaagtggagcacccgatgaggtggggagcggt
ccaggggtggggtttaacgtcaacgtggccttcaccggaggcctggacccccccatggga
gactcagagtacctgactgccttcaggtctgtggtgatgccaatagccgacgagttcgct
ccagacatcgtgctggtctcctctggcttcgacgccgtggagggacaccccccaccgctg
ggcggctacaccctgacctccaaatgttttgggtatctgaccagacagctgatgaccctc
gctggaggccgggtggtcctggcgctggagggaggtcacgacctcactgcgatctgtgat
gcctctgaggcctgcgtggccgccctgcttggacaagagctagatccacttccaaaggcc
gtcctggagcagaggcccaaccccaacgcagtgcgctctctggagaaagtcatagagact
cacagcaagtactggcgctcggtgcatcgttactcatcgcggctgggactctctctgctg
gaggccaagcgaggcgactcggaggaggccgaggccgttagcgccatggcgtctctgtct
gtagccaacaccaacacaatggatcaaagcaggactgaggaggagcccatggaggaggag
gctccgctgtaa

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