Xiphophorus couchianus (Monterrey platyfish): 114141428
Help
Entry
114141428 CDS
T05908
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114141428
Peptidases and inhibitors [BR:
xco01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
114141428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
VWA_3
Motif
Other DBs
NCBI-GeneID:
114141428
NCBI-ProteinID:
XP_027867783
LinkDB
All DBs
Position
3:6273128..6298158
Genome browser
AA seq
1223 aa
AA seq
DB search
MNKSHSPSLNESLHLLQVLSLKMFLHRSPIRGVGLWLLLLAFTHGASGQRRKEAKSSNYK
LQDDGGNGIFVTKSLYPLGRNCSLEVIFILDSSESAKTKLFQQEKIFVLRFSTKLSMLKM
TGVSLKVRMAALQYSSSVSVEHRFVDWKDLDLFHSKINDMSYIGQGTFTSFAITNATQML
LQETQKEAVRIAVLMTDGVDHPRGPNVIVAAEEAKRHGIKIFTVGLSYVSFQKENKEKLQ
AIASSPAERFVHSMEDPQLQEKLLKEMGAVAVEGCPPCVCEKGEKGSSGSPGRKGDQGDE
GPSGQKGAKGEPGLNGKPGNDGSKGFPGFKGNKGMKGNCGLPGGKGATGLEGPPGPPGLK
GEQGEIGPVGDVGPEGPAGPKGDRGHSGEPGPPGDFGIGPPGAKGEKGIQGKPGGIGPAG
KGDPGPPGPQGPAGPQGKPGIPGEGFPGPKGDRGFEGPRGNRGPPGIGIKGDKGNYGLPG
PQGPVGEPGIGLPGEKGVQGPVGLTGPRGAPGIGLTGQKGNQGLPGEPGLPGERGAGGPG
PKGDSGVPGSSGFPGIPGEDGSPGQKGDVGLPGPRGPDGIPGRGVPGGKGDKGDRGSRGQ
PGPSGPMGPLGPKGDSGNVGLPGATGPPGRGISGPKGDQGPPGPVGQMGEPGVGLPGPKG
DRGPPCPPGLPGPKGDGFVGPPGLPGPPGLPGETGLDGIGLPGPKGDRGFPGPPGPAGPP
GIGLFGPKGSTGPAGPPGLPGLPGEGAQGEKGDRGFQGIPGPRGPPGQGLQGDKGDRGLR
GETGKKGDRGQTGQSGDKGSAGRMGQKGEAGLTETEIIELIRKICNCSEPCKQKPLELVF
VIDSSESVGPQNFQVIKDLVNAVVDRTTVSWNATRVGVVLYSDINVVVVDLKQEATADEV
KSAVYAMDYLGEGTYTGSAIKKANQMFEAARRDVRKVAVIITDGQTDTRDVVSLESAVLK
ANESQIERFVIGVVNESDPNSEEFKKELNFIASDPDQDYMFLIKDFKVLKVLEKRLLRCV
FEEGKVALFDHPTIATFLLPGISQGTGKNGGAPFRTGGDTPTFPGDSRRDKIVPGYPASQ
LEPELVLPERPNTDEDRNPTEPQRFPFFDRELYRPVEEFLPPFDANKPKHQEPGANGQAG
ASTRALTKKESSLVISPPLKPSDSWRSAGCSQNLDPGPCRDYVVKWYYDATSNSCAQFWF
GSCQGNQNRFDTEKKCRETCVKV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagtcactcaccatcactaaatgagtctctccacctgctgcaggttctcagt
ttgaaaatgttcctgcacagaagtccaatcagaggcgtggggctttggcttcttctgctc
gctttcacgcatggcgcctcaggccagaggaggaaggaggcaaaaagcagcaactacaaa
ctgcaagacgacggaggaaatggtatctttgttacgaagtctttgtatcctcttggacgt
aactgtagcctggaggtgattttcattctggacagctctgaaagtgcaaaaactaaacta
ttccagcaggagaagatctttgtgttgaggttcagcacaaagctctctatgctcaagatg
accggcgtttcgctgaaggtccgaatggctgcactccagtacagcagctctgtgtccgtc
gagcacagatttgttgactggaaagacctggacttgttccacagtaaaatcaacgacatg
agctacatcggccaaggaaccttcacctctttcgccatcaccaacgccacgcagatgctg
ctgcaggaaacgcaaaaggaggctgtcaggatcgcggtgctcatgaccgacggggtcgac
catccccgcggccccaacgtgattgtggctgccgaagaggccaagcgccacggcatcaag
atcttcactgtcgggttatcatatgtctcctttcagaaagagaacaaggaaaagctccag
gccatcgcaagttcccctgcggagcggttcgtccacagtatggaggacccccaactgcaa
gagaagctgctcaaagagatgggagccgtcgcagtggaaggctgcccaccatgtgtgtgt
gaaaaaggagagaaaggcagttcaggcagtcctggaagaaaaggagaccaaggcgacgaa
gggccatcgggtcaaaaaggagcgaagggtgaacctggattaaatggcaaaccaggaaat
gatggctcaaagggatttccaggttttaagggcaacaaagggatgaaaggaaactgtggt
cttccaggaggaaagggtgccactggacttgaaggacctccaggcccaccaggattaaaa
ggagaacagggcgaaataggaccagtgggagacgttgggcctgaaggcccagcaggacct
aaaggggacagagggcattctggtgaacctggaccaccaggagactttgggatcggtcct
ccgggagccaagggtgaaaagggaattcagggaaagcccggtggaattggaccagctggg
aaaggagatccaggaccgcctggcccccaaggaccagccggaccccaaggaaaacctgga
attccaggagaagggtttccaggaccaaaaggggacagaggatttgaaggtccacgagga
aaccgcgggcctcctggtatcgggatcaaaggtgacaagggtaattatgggcttccagga
ccccaaggtccagttggtgaaccaggaattggacttcctggggaaaagggagtccagggt
ccagttggacttacaggacccagaggagctccaggaataggactaacggggcaaaagggg
aaccagggtctcccgggtgagcctggactaccaggagagaggggagcaggaggaccagga
ccaaagggtgattctggagttccaggttcatcaggattccctggtataccgggagaggac
gggagtccgggacaaaaaggtgatgttggtttgccaggacccagaggacctgatgggatt
cccgggagaggagttcctggaggaaagggcgacaaaggggacaggggcagcagaggccag
ccaggtccgtccggtccaatgggaccactgggtccaaagggcgattcaggaaacgtcgga
ctgccaggagcgactggacctccagggaggggcatttctggtcccaagggagatcaaggc
ccaccgggtccagttggacaaatgggagagcctggtgttggtttacctggacccaagggc
gaccgagggccgccttgtcctcctgggcttccaggaccgaaaggtgacggtttcgtcggc
cctccaggactcccaggacctcctggcctgccaggagagactggacttgatggcattggt
ttgccggggcccaagggggacaggggttttcctggaccgcctggtcctgctgggcctcca
ggaattggtctgttcggtcctaagggttcaacaggtccagctggtcctcctggccttcca
ggtttaccaggagaaggtgcacaaggagagaagggggatcgtggatttcaggggattcca
ggacccagaggtcctccaggacaaggtctgcaaggagacaagggagacagaggactcaga
ggtgagactggaaaaaagggagacagaggacagactggacagtcaggagacaaaggatct
gcgggcagaatggggcagaaaggggaagctggactaacagagactgagattatagagcta
atcagaaagatatgcaactgtagcgagccctgcaagcaaaaacctctggaactggtcttt
gtaatcgatagctcagagagcgtggggcctcaaaacttccaagtgatcaaagacttggtg
aacgctgtggtggaccgcaccacagtcagctggaacgccacgcgtgtgggtgttgtcctc
tacagcgacattaacgtagtcgtggtcgacctcaagcaggaagccacagcggatgaggtc
aaatccgcagtttacgccatggactacctgggcgagggaacctacacgggcagcgccatc
aaaaaagccaaccagatgtttgaggcggcacggcgggatgtgaggaaggtggcggtcatc
atcacagatggacagactgacacaagggacgtggttagcctggagagcgcggtcctgaaa
gctaatgaaagtcaaattgagaggtttgttattggcgttgtgaatgaaagtgaccccaac
tcagaggagttcaagaaggagctcaacttcatcgcctcagatcctgaccaggattacatg
ttcctgatcaaagacttcaaagtgcttaaagttcttgagaaaagactcctgcgttgtgtc
tttgaagaaggaaaggttgccctttttgaccacccaacgatagccacgttccttcttcct
gggatttcacaagggactggtaaaaatggaggagctccatttaggacgggtggagacact
cccactttcccaggagactccaggagggacaagatagtgccaggttacccagcatcccaa
ttagagccggagttggtccttcccgagagaccaaacacagacgaggacagaaatcctaca
gaacctcagaggttccccttctttgacagggagctttaccgacctgtagaagagttcctc
ccaccgtttgatgcaaacaaacccaaacaccaagagcctggagccaacggacaagccggt
gcttcaacgagggctctgaccaagaaagagtcgtctttggtaatttctcctccactaaag
ccatcagactcctggagatcagcgggttgcagccagaacctggatccaggcccatgtcgg
gactacgtggtgaagtggtactatgatgccacatcgaactcctgcgcccagttctggttt
ggcagctgtcaaggaaaccaaaaccggtttgatacagagaagaaatgtagagaaacctgt
gtaaaggtctaa
DBGET
integrated database retrieval system
