Xiphophorus couchianus (Monterrey platyfish): 114141532
Help
Entry
114141532 CDS
T05908
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114141532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114141532
03021 Transcription machinery [BR:
xco03021
]
114141532
03036 Chromosome and associated proteins [BR:
xco03036
]
114141532
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
ARID
114141532
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114141532
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114141532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
114141532
NCBI-ProteinID:
XP_027867893
LinkDB
All DBs
Position
3:complement(19958789..19979987)
Genome browser
AA seq
2283 aa
AA seq
DB search
MAAQVATLNTSSPSELKKPDRDPKEDTVPGDKQSDKKQPCLDSESPGRGDLQDGADGGNA
GGGGEPEMKNGNGNPPRVNNNTPNDSVGPEGNNHPGFVHHHGPTFSPPSYGYSQHYGRPA
FHQYGGQQSPGMAAAAGPGVQSSNMMDPYQPNSHEHGFSNHQFNNYNPFPNRTPHPGQAF
GMNSPRSAQAPTAGGQPAKQQPPPGGPTAMAGSYSNQRYNIGNPQPTSTPTLNKLLTSPS
STRGYPNYPSGGDYSSQEGASKGPADMGSSGQYAGSNPGWQQRTHHPSPMSPGSAGQPLA
RNQPPGPMDPMGKIRGQPYGAGSPYIQQSQQVPPTGPQSGPGYPGQGYGTPGPQRYPVGM
PGRTPGSMSAMPYGPQMGSYGQQGPGAYGSQGQAPYYNQPGQAPHQSQQQSLYSQQQPGQ
PGRQSPYPGQPHPPSSAPHNQGGPPYQQPHMPPQSQGPLPGPSQGAPQSQPPYSQAPATQ
PSQSPYGQQQGPPTQTAQQPSSQAPPGSQGQSSYPGSSQGPQQAPPQQQQQAQSHPQQPP
GHGQHPQGPPAAYPPNTQQQQQAQQSPYQRFPPPQQQEISQDSFQSNAPASSQPKSGPED
GQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPG
IRGPSPSPAGSPASASTPRTGPLSPANLPGTQMPPRPSSVHSDGTLHPAMSQSPMAQDRG
FMQRNPQMPPYVSPQSASALSPRQSSGGQMHPGMAPYQQNNSMGGYGQQGGQYGPQGYPR
QPAYGNMPNANYPGPGMGSMNPMAGQGGGPPYAGIPPGRMPPNQMGARPYGPNMGPSMGP
NMPPNMGNMPPQVSSGMCPPPGMNRKPQDPAAMQHPSSNSMLNRMPGYPNMSQGMMGSGP
PYGPPMNSMPGMMNTPGGSPYPMGPNMANNTSGMAPSPEINNKMNNKVDGGATPKPESKS
KKSNSSTTTCEKITRLYELGPEPDRKLWVDRYLAFVDEKAMGMTNLPAVGRKPLDLFRLY
VSVKEIGGMMQVNKNKKWRDLATTLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPP
EIFTDNKKNQAAKVQPPSPASLCSTAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPH
TQMPPMPPGPRSSVNLQDPFSDGSDPAFPRKNMTPNSTYQPGMNTADLPGRMGPYEPNKD
PFSNMRKVGEQFLPANQGPNNVVGDQQQPPQQQPPFNRGPPGAMGTMPMGPRQQYPYGPG
YDRRPEQGMGPEGNMGSGPPQPNPMMPANTDTGMYSPNRFPPQQPRHDSYGNQYPGQGTP
PTGSYPNQQPGMYPQQGYKRPVEGGYPPSKRHEAEYSSSFTGGQQGPQQQQQGGTAAPSS
GQQEPYNQYSGSGPYPGPDRRPPGPSNQFPFPFGRERMQGATGPNAQPNMPPQMMQSGPE
GPQGGMWQGPRDINYQNYPRQGGPGGPTQGPGYHGMNRPDEMMQSDQRMNHDGQWGAQMG
PRQPPYGPAGSGQPMPRSVQTNYQPPQGVQNHIPQVSSPASIPRPMEARTSPSKSPYTHG
LMKMQKAGPPVPASHIVPPPVQSPLIRRDMPFPQGSVEGTLPVLKPRRRLTMKDIGTPEA
WRVMMSLKSGLLAESTWALDTINILLYDDNSISTFDLNTLPGLLELVVEYFRRCLIEIFG
ILREYEVGDPGQRTLLDPDALKRDLDNLEEEQPRFEDMEQEETDDEEKEEHEMERSVPVK
EEEDQEPCSQSRNEKTQEERRSKGSSSEQTGSVQSLPAYEKPKQASKFDKFPVKVVRKRD
PFVAAQLNNHGKVQEFDSGLIHWSAGGGDSTEHIQTLFEPRKNFLEPRQRIPVPSALLKR
RPLDEDIRGSCLPTEEDRMKHHDEEERPKQSSLSEKSTDSEKAGLTVGNDEEQPSDSETK
LAEKGPKSHQENNRPILASGSIFNQQAQQTGTILEDEPHSKDEGPLVTLSDWQDSLARRC
ICISNIVRSLSFVPGNDHEMSKHPGLLLILGHLILLHHWHPERKQAPLTYEKDEDSDEGV
GQKDEWWWDCLEILRENTLVTMANISGQLDLSTYPESICLPLLDGLLHWAVCPSAEAQDP
FPTLGPHSALSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGNLVRLIGDRKVAV
CREMAVVLLANLAQGDTTAARAIAVQKGSVGNLLGFLEDSLAATQLQQSQSSLLHLQGMP
FEPTSPDMMRRAARALHALAKVEENHSEFTLHESRLLDLSVSPLMNSLVSHVICDVLFLI
GQS
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccactcttaacactagttcgccttctgaacttaaaaagccggat
cgagacccgaaggaagatacggtaccaggggacaagcagtccgacaaaaagcagccgtgt
ttggacagcgaatcgccgggccggggagatctgcaggacggggccgacggtggaaatgca
gggggaggaggggaaccagagatgaagaacgggaatgggaacccacccagggttaataat
aataccccgaatgactctgtgggaccggagggaaacaaccaccccgggttcgtgcatcac
cacggtcccactttctctccgccttcgtacggatacagtcagcactacggtcggcccgct
tttcatcaatatggcggacaacaaagccctggcatggcagctgctgcgggtccgggtgtg
cagtcgagcaacatgatggacccgtatcaacccaattcacacgagcatggcttctcgaat
caccagtttaacaactacaacccattcccgaacaggactccacacccgggccaggcgttc
ggcatgaactcccctcgcagcgctcaggcgccgacagctgggggccagccagctaagcag
cagccaccgccgggaggacccacggcgatggctggatcttacagtaaccagagatataac
atcggaaatccccaaccaacatccacaccgacgctcaacaagctcctgacctctcccagc
tcaacacgggggtatccaaactatccatctggtggcgactacagcagccaggaaggagct
agtaagggaccagcagatatgggcagcagcggtcagtacgcagggagcaacccaggctgg
caacaaagaacccatcacccgtcgcccatgagtccggggagtgctgggcagcctctagcc
agaaaccagcctcctggtcctatggatccaatggggaaaattagaggtcagccatatgga
gcaggcagtccatacatccagcagtctcaacaggtgcctcctacaggtcctcagtctggg
cctgggtatcctggccagggatacggcacaccaggtccacagcgatacccagtaggcatg
ccaggtcgtacaccaggaagcatgagtgccatgccctacggtccacagatgggatcttat
ggccaacagggaccaggagcctacggctctcagggccaggcgccgtattacaaccagcca
ggtcaggctccgcatcagagccagcagcaatccctttactcccagcaacaacccggtcag
cctgggcggcagtcgccttaccccgggcagccccaccctccgtcttcagctccacacaac
caggggggaccaccctatcaacagccccacatgcccccacagtcccagggtcccctgcct
ggcccgtcccaaggcgccccccagtctcagccgccttactctcaggcgcctgccacgcag
cccagccagtctccgtacggccagcagcaggggcctccaactcagaccgcacagcagcca
agttcccaggctccccccggatcccaaggccaatccagctacccagggtcctcacaaggc
ccccagcaggcccctccgcagcagcaacagcaggcgcagtcccacccgcagcagccaccg
ggacacggccagcatccacaggggccgcctgcagcctacccgccaaacactcagcagcag
cagcaagcacagcagtcaccttatcagcgctttcctcctccacaacagcaggagatatcc
caggactcgtttcagtccaatgcccctgcatcctctcagcccaaatctggtccagaggac
ggtcaaggccgtccatccagccttccggacctgtccgggtcgatcgacgacctgccgacg
ggcacggagggcgccctgagtcctggcgttagcacgtctggcgtgtcgagcagccaggga
gagcaaagtaacccagcccagtcgcccttctctccgcacacgtctccccacctgccaggc
atccgaggcccctcgccttctccagctggctcccccgccagcgccagcactccccgcaca
ggcccgctgtcacccgccaacttgccagggacccagatgcctccgaggccatccagcgtt
cactcggatgggacgctgcaccctgcaatgagccagtctccaatggcgcaggacagaggg
ttcatgcagcgaaaccctcagatgcctccctacgtatccccccagtcggcctctgcactg
tcacctcgccagtcctctggaggacagatgcatcctgggatggcgccttatcagcagaac
aactccatgggtggctatgggcagcagggaggacaatacggtccccaaggttatccccgc
caaccagcctatgggaacatgcccaatgccaactaccctggcccaggcatgggctccatg
aaccccatggcgggccaggggggaggcccgccgtatgctggcatccctccagggagaatg
cctccgaatcaaatgggggctcgtccctacggccccaatatgggccctagcatgggtcca
aacatgcctccgaacatgggcaacatgccaccccaggtcagttcaggaatgtgcccacct
ccaggaatgaacagaaagccccaggatcctgcagccatgcagcacccctccagcaactcc
atgctcaacagaatgcccgggtaccccaacatgtcgcaaggcatgatggggtccggtcca
ccgtatggcccaccgatgaacagcatgcctggaatgatgaacactccaggtggatcgcct
tatcccatggggccaaacatggccaacaacacaagtggtatggctcctagcccagaaatt
aacaataagatgaataacaaagtagatggcggtgcaacaccaaagccagaatcaaaatca
aagaagtccaactcatccactacaacgtgtgaaaagataacacgcctctatgagctggga
ccagaaccagacaggaagctttgggtggaccgttacttggcctttgtggatgagaaagcc
atgggcatgaccaacctgcccgctgtggggcgcaagcctctcgacctcttccggctctac
gtctccgttaaagaaatcggaggaatgatgcaggtgaataaaaataagaagtggcgtgat
ctagccaccactctgaatgtgggtacatccagcagtgctgccagttctttgaagaaacag
tacatccagtgtctgtatgccttcgagtgtaaaatagaacgtggtgaagatcctcctcct
gagatcttcacagacaacaaaaagaaccaggctgctaaagtccagcccccctctccagcg
tccctctgctccacagctgggtcagggtcccttcagggtccacaaacgcctcagtccacc
agcagctcaatggctgaggggggcgaccttaagccccccacgccggcatccactccccat
acccaaatgccccccatgccacctggccctaggagcagtgtaaatctgcaagaccccttc
tcggacggaagcgaccccgcttttcccagaaagaacatgactcccaactccacctatcag
cccggcatgaacacagcagacttgccaggccgaatgggcccctacgaacccaacaaggac
cccttcagtaacatgcggaaagtcggggagcagtttctgcctgctaaccagggccctaac
aacgttgtgggtgaccagcagcagccgccacaacaacagcctccattcaacagaggaccg
cctggggccatgggcacaatgccaatggggcccagacaacagtatccctatggaccaggc
tatgacaggagaccagagcaaggaatgggcccagagggcaacatgggatctggacctcct
cagccaaacccgatgatgcctgccaacaccgacacggggatgtattctccaaatcgcttc
ccaccacaacagccacgacatgattcctatggaaatcagtatcctggacaaggaacgccc
cctactggttcctacccaaatcagcagcctggaatgtacccacaacagggttataagcgt
cctgtggagggagggtaccccccatcaaaacgccatgaggcagagtacagcagttctttc
actggtggacagcaaggaccgcagcagcagcaacagggtggcaccgctgctccatcatca
ggacagcaggagccatacaatcagtacagcggcagcgggccctaccctggccctgaccgc
cgtccacctggccccagcaatcagttcccatttccttttggtcgagaacggatgcaggga
gcaactgggcccaatgctcagcctaacatgcctcctcagatgatgcagtcggggcccgag
ggtcctcaagggggcatgtggcagggacctcgagacattaactatcagaattaccctaga
caaggtggacctggggggcccactcagggacccggctaccatggcatgaaccgccctgac
gaaatgatgcaatcagaccagcggatgaatcacgatggccagtggggggcccagatgggc
cctcggcagcctccctacggtccagccgggtctggacagcccatgcctcgttcagtccag
accaactaccagccccctcagggtgtgcagaaccacattccacaggtgtcgagccccgcc
tccataccccgccccatggaggctcggacatcaccgagcaaatctccttacacgcacgga
ttgatgaagatgcaaaaggctggccccccggtacctgcatcccacattgtgccccctcca
gtgcagtcgcctctaataaggcgagatatgcctttcccccagggttctgtcgaaggaaca
cttcctgtccttaaaccacgacggagactcaccatgaaagatattggaaccccggaagcc
tggagagtcatgatgtccttaaagtctggtttattggctgaaagtacatgggccttagat
accatcaatattctgctgtatgatgacaacagtatatcaaccttcgatctcaacacgtta
cctgggctgctggagttggtcgtggagtatttcaggcgctgcctgatagaaatcttcggt
attctgcgggagtatgaagttggggaccctggtcagaggactctgctcgatcctgatgcc
ttgaaacgggacctggacaacctggaagaagagcaaccacggtttgaggacatggaacaa
gaggagacagacgacgaagagaaggaggaacacgaaatggagcggtctgttcccgtgaag
gaggaggaagaccaagagccatgctcgcaaagtcgaaatgagaagacacaagaagagagg
aggagcaagggttcgtcatctgaacagacgggctctgtgcaatctctgcctgcctatgag
aaacccaaacaggccagcaagtttgacaaatttccagttaaggtggtacgaaaaagagac
ccgtttgtggctgcccagttaaataatcatggtaaagttcaagagtttgacagcgggcta
attcactggagcgcgggagggggcgactcaacagaacacatccagaccctctttgagcct
cgcaagaacttcttagagccacgacaacggatacccgtgccttcagctctactgaagcgt
cggccgctggatgaagacatacggggaagttgtttgccaactgaggaagacagaatgaag
catcacgatgaagaagaaaggccaaaacagagcagtttgtcagaaaaatcaacagactct
gagaaagctggcttaacagttggcaatgatgaggagcaaccgtctgattcagagacgaag
ctggctgagaaagggcctaaaagtcaccaagagaataatagacccattctggcttctgga
agcattttcaaccaacaggcacagcagactggcaccatcctagaagatgagcctcacagt
aaagacgaagggccgctcgtcacgctgtccgactggcaggactcgctggcacgtcgctgt
atttgtatctcgaatattgtccgcagcctctcctttgtgccaggaaatgaccacgagatg
tccaaacatcccggactgctgctcatactcggacacctgatactgctccaccactggcac
cctgagcgcaagcaggcccctctcacctacgagaaggacgaggattcagatgagggagtg
ggccagaaggatgagtggtggtgggactgcttggagatcttgagagagaacacgctggtc
actatggcaaacatttcaggtcaacttgacctttccacctaccctgagagcatttgccta
cccctgctggatggtcttctccactgggcggtgtgcccctcggcagaggcccaggacccc
ttcccaaccctgggcccccatagtgctttgtcacctcagagactggtcctggagactctt
agcaaactgagcattcaagataacaatgtggacctcatcctggccactccccctttcagt
cggttggagaagctgtatgggaacttggtgcggttaattggagacaggaaggttgcagtt
tgcagggagatggctgtcgtcttactggccaacctggcccagggtgacactactgcagcc
cgagcaattgctgtccagaagggcagtgtgggcaacttgctcggcttcctggaggactct
ctcgctgccacccagctacaacaaagccagagctctctgctgcacctacaagggatgccc
ttcgagcccaccagcccggacatgatgcgacgagctgcccgggctctgcacgccttagcc
aaggtggaggagaaccactcggagtttacactacacgagtcgcgacttctcgacctttca
gtgtctcccctaatgaactcgctggtttctcacgttatctgtgatgtactctttttgatc
ggccagtcatga
DBGET
integrated database retrieval system
