Xiphophorus couchianus (Monterrey platyfish): 114143250
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Entry
114143250 CDS
T05908
Symbol
myo5a
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
114143250 (myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114143250 (myo5a)
04131 Membrane trafficking [BR:
xco04131
]
114143250 (myo5a)
03029 Mitochondrial biogenesis [BR:
xco03029
]
114143250 (myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114143250 (myo5a)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
114143250 (myo5a)
mRNA cycle factors
P-body specific factors
114143250 (myo5a)
Membrane trafficking [BR:
xco04131
]
Others
Actin-binding proteins
Myosins
114143250 (myo5a)
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
114143250 (myo5a)
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
114143250 (myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
nSTAND3
AAA_16
HTH_17
Motif
Other DBs
NCBI-GeneID:
114143250
NCBI-ProteinID:
XP_027870912
LinkDB
All DBs
Position
4:27841040..27930052
Genome browser
AA seq
1896 aa
AA seq
DB search
MNRELEYMFVQSARVWIPDAEEVWKSAELTKDYKNDDASLQLMLEDGTTIDHKLDPKTKN
LPYLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYETLPI
YGTDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMR
YFATVSGSASEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDNRYRIIGAN
MRTYLLEKSRVVFQADEERNYHIFYQLCASANQPEFKNLRLSTANDFLYTRQGRSPVIEG
VDDAKELRTTRHAFTLLGINESYQIGLFQVLAAILHLGNVEIKDRDSDSSLIAPNNRHLT
AFCELVGVTYQDMSQWLCHRKLKTATETYIKPLPRLQATNARDALSKHIYAKLFNWIVEH
VNKALVTNIKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYM
KEQIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKTCSLF
EKPRMSNRAFIIQHFADKVEYQCEGFLEKNKDTVNEEQIHVLKASKKFNLLVELFQDEEK
ATTPTGQVPGTGGRTRLSIKPDKGRDTSSKEHKKTVGCQFRNSLQMLMETLNATTPHYVR
CIKPNDFKLAFSFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDV
LPDKKLTCKNVLEKLVQDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRC
WLARKKYLRQRSAAITIQRFTRGYQARCLAKFMRRTQAATIIQKYQRMCVERKRFRQKQA
AALAMQTILRAYMARQKYQALLREHKAVIIQKHVRGWLARCWYKRCLEAIVYLQCCIRRM
RAKRELKKLKIEARSVEHFKKLNKGMENKIMQLQRKIDEQNKDNRVISERLVSLESSYAS
ESERMRGELGRLRGVEEDAKNKANQVSSLLEELEKLRKELSVTQQEKKTIEDWAQKYRDE
MEKMVSELKDQNGLLKKEKDDLNRMIQEQSQQMTEKMTRAIAQETQQLETDLNEERSRYQ
NLLTEHLRLEEKYDDLKEELAQSKNVSKPGHRRTDSTHSSNESEYTYNSEYAELEDGSRV
GEDVTRGMDTSLTLKLQKRVTELEQEKQSLRNELENREEQFQRARARDDAQFRKARGAEL
EYESLKRQELESENKKLRHNLAEMRQSLLGGAAARAGAPGSPAYKVLLDQLNASCEELQV
RKEEVLILRSQLVSQKEALHHKDEKETMTEPSVFAQDVNKLKDADELKQAYVGLKDTNRS
PRSVRPALEVSDLLSRLRSAAPDLHRLNEDGELWLVNQGLKETTRLLEQQLQTQRRTYDS
EVESLRGELQNVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLELLADDPTA
SREARVIILRRMVDLMEQLEKQDRTIRKLKKQLKVYSKRIGEMGAGHTEGQTSPGQMVEE
PIHPVNIPRREKDFQGMLEYKKEDEMKLVKNLILELKPRGVAVNLIPGLPAYILFMCLRH
SDYVNDDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLANTCRFLHCLKQYSGDEVFMK
HNTSRQNEHCLSNFDLAEYRQVISDLAIQIYQQLVKCMENILQPMIVSGMLEHETIQGVS
GVKPTGLRKRTSSIADEGTYTLDSILRQLSAFHSTMCQHGTDPELIKQVVKQLFYIIGAV
TLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKGLMNCGAKETLEPLIQAAQLLQVKKK
TDEDAEAICSMCHALTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQTRLRDRCESPQLLM
DTKMIYPVTFPFNPSSLALETIQIPTSLNLSFLTRV
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgggagctggagtatatgttcgttcaatctgctcgggtttggatccccgacgcg
gaggaggtgtggaagtctgccgagctcaccaaggactacaaaaatgacgacgcctcgctt
cagctcatgctggaggatggaacgaccattgatcacaagctggaccccaagacaaagaac
ctgccttacctgcggaacccggacatcctggtgggcgagaacgacctcactgccctcagc
tacctccacgagcccgccgtgctccacaaccttaaagtccgcttcattgactcaaagctc
atctacacctactgcggaatcgttctcgtggccatcaacccgtacgagacgttgccgatc
tatggaacggacataatcaacgcctacagcgggcagaacatgggagacatggacccacat
atctttgccgtggcagaggaggcttacaagcagatggcaagagatgagagaaaccagtct
attatcgtgagtggagagtcgggagcaggaaagactgtctcagccaaatatgccatgcgg
tactttgctacagtcagtggttctgccagcgaggccaacgtagaagagaaggttttggct
tccaaccccatcatggaggccatcggaaacgcaaagaccacccggaatgacaacagcagc
cgctttggcaaatacatcgagatcggcttcgacaatcgatatcgcatcatcggggccaac
atgagaacatatctgctggagaaatccagagtggtgttccaggcggacgaggagaggaat
taccatatcttctatcaactctgtgcatcagctaatcagcctgagttcaagaatctgagg
ctaagcaccgcaaacgacttcctctacaccaggcagggccgcagtcccgtcatcgaaggt
gtagacgacgccaaagagcttcgcaccactcgccacgccttcacacttctgggtataaac
gagtcgtatcagatcggcctgttccaggtcttggctgctattcttcaccttggaaacgtg
gagataaaagacagagactcagacagcagccttattgctcccaacaatcgtcacctgacg
gcgttctgtgagctggtgggcgtgacctatcaggacatgtcccagtggctgtgccacagg
aagctgaagacagccacagagacctacatcaagcccctcccccggcttcaggccaccaac
gctcgcgacgctctgtccaaacatatctatgccaagctgttcaactggatcgtagagcat
gtgaacaaggctctggtcaccaacatcaagcaacactccttcattggagtcctggacatc
tatgggtttgaaacgtttgaaatcaacagctttgagcagttctgcatcaactacgcaaat
gaaaaactgcagcaacagttcaacatgcacgtgttcaagctagagcaggaggagtacatg
aaggagcagatcccctggactttgatcgacttctatgacaatcagccctgcatcaacctc
atagaagctaaaatgggcatcctggacctgctggacgaggagtgcaagatgccgaaaggt
tctgatgactcctgggctcagaagctgtacaacacccacctgaagacttgttctctgttt
gagaagccgcgcatgtccaaccgcgccttcatcatccaacattttgctgataaggttgag
tatcagtgtgagggtttcctggagaagaacaaggacacagtgaacgaagagcagatccat
gtgctgaaggccagcaagaagttcaacctgctggtggagctgttccaagatgaggagaag
gcgaccacccccaccggtcaggtgcccggtaccgggggccggacccgcctcagcatcaaa
ccggacaagggccgggacacgagcagcaaggagcacaagaagacagtgggctgtcagttt
cgtaactctctccaaatgttgatggagactctgaatgccaccactccacactacgtccgc
tgcattaaacccaacgacttcaagctggccttctcgtttgatccaaagcgagcagtgcag
cagctcagagcttgtggcgttctggaaaccatccgcatatctgcggccggcttcccgtcc
agatggacgtaccaggagttcttcagtcgctacagagtgctgatgaagcagaaagatgta
ctccctgacaagaagctgacctgcaagaatgttctggagaaattagtacaggaccaggat
aagtatcagttcggtaagactaagatcttcttcagggccggccaggtggcatacctggaa
aagctgagagcggacaagctgcgtgccgcctgcatccgcatccagaagaccatccgctgc
tggctggcacgcaagaagtacctgcgccagcgcagcgccgccatcaccattcagaggttc
accaggggataccaggcccgctgtttggcgaagttcatgcggcgcactcaggcggccacc
atcatccagaagtaccagaggatgtgtgtggagcggaaacgcttcaggcagaagcaggct
gctgcgctggccatgcagaccatcctcagagcctacatggcccggcagaagtaccaggcg
ctgctgcgggagcacaaggcggtcatcattcagaagcacgtccgcggctggttggcccgc
tgctggtacaagcgctgcctcgaggccatcgtctacctgcagtgctgcatccgcaggatg
agagccaagcgggagctgaagaagctgaaaatcgaggctcgctcggtggagcacttcaag
aagctcaacaaaggcatggaaaacaaaatcatgcagctgcagaggaagattgacgagcag
aacaaggacaaccgggtgatcagcgagagactggtctctctggagagttcgtacgcctca
gagagcgagcgcatgcgcggcgagctgggccggctgcgaggggtggaggaggacgccaag
aacaaagccaaccaggtgtcgtctctgctggaggagctggagaagctgaggaaggagctg
agcgtcacgcagcaggagaagaagaccatcgaggactgggcgcaaaagtacagggacgaa
atggaaaagatggtttccgagctgaaggatcagaacggcctgctgaagaaagagaaagac
gacctgaaccggatgatccaggaacagagtcagcagatgacagagaaaatgactcgtgcg
atcgcgcaggagacccagcagctggagacggatctgaacgaggagcgctcccgctaccag
aacctgctgaccgaacacctgcgcctggaggagaagtacgacgacctgaaggaagagctg
gctcaatccaagaacgtctccaaaccgggccacaggagaacagactccacccacagcagc
aacgagtcggagtacacgtacaactcggagtacgccgaattagaagacggttcccgcgtt
ggcgaagacgttacacggggaatggacacctcgctgaccctgaagctgcagaaacgcgtt
acggagctggagcaggagaagcagtcgctgcgcaacgaactggagaacagagaggagcag
ttccagcgggctagagccagggatgatgcacagttcaggaaggctcgcggtgcagagctg
gagtatgagtccctgaagcgtcaggagctggagtcggagaacaagaagctgaggcacaac
ctggccgagatgaggcagagcctgctgggcggtgcggccgcaagggccggcgcgccgggc
tcgcccgcctacaaggtgctcctggaccaactcaacgcttcctgtgaggagctgcaggtc
cgcaaggaagaggtgctgatcctgcggtcccagctggtcagccagaaggaggccctgcac
cacaaggatgagaaggaaaccatgacggagccttcggtgtttgctcaggatgtgaacaaa
ctgaaagacgccgacgagttgaagcaagcctacgttggcctcaaagacaccaacagatcc
cccagatcagtgcgtccagcgctggaagtcagtgacctcctgagtaggctgagatctgca
gctccagacctccacaggctgaatgaggacggggagctgtggctggttaatcagggctta
aaggagaccaccaggttgctggagcagcagctgcagacccagcggaggacgtacgacagc
gaggtggagtcgctgcgcggcgagctgcagaacgtgaaggaggagaacaaccggcagcag
cagctgctggcccagaacctgcagctgcctcccgaggcccggatcgaagccagcctgcag
cacgagatcacccggctcaccaacgagaacctggaactcctggccgacgaccccacagcg
tccagagaggctcgagtcatcatattacggcggatggttgatctgatggagcagctggag
aagcaggacagaaccatccggaagctgaagaagcagctgaaggtttactccaagaggatc
ggagagatgggggcgggtcacaccgagggacagacgtctccaggacagatggtggaggag
cccatccacccggtcaacatcccccgcagggagaaagacttccagggaatgctggagtac
aagaaggaggatgagatgaagctggttaagaatctcattctggagctgaagcctcgcggc
gtagccgtgaatctgatcccaggtctgccggcctacatcctgttcatgtgtctgagacac
tcggactacgtcaacgacgaccagaaagttcggactctgctcacgtcgaccatcaacagc
atcaagaagatcctcaagaaacgaggcgatgactttgagacggtctcgttctggttggcc
aacacctgccgcttcctgcactgtctgaaacaatacagcggagatgaggtctttatgaag
cacaatacatccaggcagaatgagcactgcctgtccaactttgacctggcagagtacaga
caggtgatcagtgacctggccatccagatctaccagcagctggtcaaatgcatggagaac
atcctgcagccaatgatagtgtctgggatgctggagcatgagaccatccagggcgtgtcc
ggagtgaagcccacgggtctccgcaagcggacgtccagcatcgccgacgaggggacctac
accctggactccatcctgcggcagctcagcgccttccactccaccatgtgccagcacggc
accgaccccgagctcatcaagcaggtggtgaagcagctcttctacatcatcggagccgtc
acgctcaacaacctgctgctgcgcaaggacatgtgctcctggagcaaaggcatgcagatc
aggtacaatgtgagccagctggaggagtggctaagagacaaagggctgatgaactgtgga
gccaaagagaccctggagcctctgatccaggccgcccagctgctgcaagtgaagaagaag
acggacgaagacgccgaggccatctgctccatgtgccacgctctcaccaccgctcagatc
gtaaaggtcctgaacctctacactccagtcaacgagttcgaggagagagtttccgtttct
ttcatacgaaccatacagacccgcttgcgagaccgctgcgagagtccccagctgttaatg
gacaccaaaatgatctacccggtcaccttcccattcaacccgtcctccctcgccctggaa
accatccagattcccacctccctgaacctgagcttcctcaccagggtctga
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integrated database retrieval system
