Xiphophorus couchianus (Monterrey platyfish): 114144522
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Entry
114144522 CDS
T05908
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114144522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114144522
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114144522
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114144522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-RING_10
zf-RING_4
zf-C3HC4_4
zf-RING_6
zf-ANAPC11
Prok-RING_4
zf-RING_11
zf-Nse
Motif
Other DBs
NCBI-GeneID:
114144522
NCBI-ProteinID:
XP_027873246
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All DBs
Position
1:14358671..14367097
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AA seq
426 aa
AA seq
DB search
MFFYFVLTPTRTQERRRDRKREEGDGAQSSLIQPHSSLTGSGELLRGVRTLYSHLEEFMG
SQVSSDEMSVRAGQGSDEVLVSQAVWDYLAAAGRPWLIDFQHKQGMSAGIIRRGERGGCC
AVRLQPVEGSRSTRSGMMDGPISSETRKAFIDLCRCARKEMSKQEGGPKRKRALLPCVGV
LEQNGEGNLQAPPSLPRRSQRQQQRFRKPADEEVCAMLHEASLRKDMDSGIGSHSEAEDS
GICSICMGDIVERTTLEKCGHSFCRSCLERAFKVKQACPVCRLVYGQLVGNQPANGSMMV
ERDPDMELPGHEGYGCICIIYSFPPGVQTLDHPNPGIRYPGTDRVAYLPDSPEGNRVLGL
LRRAFEQRLIFTIGTSMTTGLQNVITWNDIHHKTSIFGGPPCFGYPDPTYLVRVTEELRE
KGIAMN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctactttgtgttgacgcctacaaggacacaggagcgcagacgagaccgaaaa
cgagaggaaggagatggagctcagagctctttaatccagcctcacagctccctgacaggc
agtggagaactactcagaggggtgaggacgctttattcgcacttggaggaatttatggga
tcacaagtttcctctgatgagatgagtgtgcgtgctggccagggcagtgatgaggtgcta
gtttctcaggcagtttgggattacctggctgcagctgggcggccctggctcattgacttc
cagcacaagcaggggatgagtgccggcatcatcaggcgaggagagagggggggctgctgt
gctgtgcggctacagccggtggaaggctcgaggagcaccagatctgggatgatggatgga
cctatctctagcgagacgcgtaaagccttcattgacttatgccgatgtgcccgcaaagaa
atgagcaaacaggagggaggacccaagaggaagagggctctgctgccttgcgtgggggtc
ctggagcagaatggagaagggaacctccaggctccaccttccctgccacggcgctcccag
agacagcagcagaggttcaggaaacctgctgatgaggaggtgtgcgccatgctccacgag
gcctctctgaggaaagacatggactctggcattgggtcccacagtgaggccgaggacagt
ggcatttgctcaatttgcatgggggacatagtggagaggaccaccctggagaaatgcggc
cattcgttctgccgctcatgtctggaacgagcctttaaggtgaagcaagcttgtcccgtg
tgcagactggtttatggccagctggttgggaaccagcctgccaatggttcaatgatggtg
gagcgggaccctgatatggagcttcctggccatgagggctacggatgtatctgcatcatc
tacagcttccctcctggagtacagacactcgatcacccaaaccctggcattcgataccca
ggcacagaccgcgtggcctacctccctgatagcccagaagggaaccgcgtgctgggcctg
ctgcgtcgggccttcgaacagcgccttatcttcaccattggtacctccatgactacgggc
ctgcaaaatgtcatcacttggaatgacattcaccacaagacatccatattcggcgggcca
ccctgctttggctacccagaccccacatacttggtgcgtgtgacagaggagctcagagaa
aaaggtattgccatgaactga
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