Xiphophorus couchianus (Monterrey platyfish): 114145971
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Entry
114145971 CDS
T05908
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04510
Focal adhesion
xco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114145971 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114145971 (lamc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Death
SlyX
Motif
Other DBs
NCBI-GeneID:
114145971
NCBI-ProteinID:
XP_027875481
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All DBs
Position
6:28987414..29035569
Genome browser
AA seq
1595 aa
AA seq
DB search
MQNLIRALVACSWLAAVCVRGAMDECADEQGRQQRCMPEFVNAAFNVTVEATNTCGSPPE
EYCVQTGATGVTKSCHICDARDPRNHHNAAYLTDYNNQQDATWWQSQTMLAGIQYPNSIN
LTLHLGKAFDITYVRLKFHTSRPESFAIYKRSREGGPWVPYQYYSGSCEKTYRKPSHGFI
QTGGDEQEALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPILQDWVTATDIRVTLN
RLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKDSGGRLVCDCKHNTEGV
DCSVCKAFFNDRPWMRATADSANECLPCDCNRKSSDCYFDAELYRATGHGGHCRNCADNT
DGPNCERCLDNYHRDQSGNRCLPCNCNSIGSESPQCNNRGVCACKPGVTGEKCDRCQPGF
HSLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKPGYFNLDPNNPQGCTA
CFCFQHSSVCDSAEGYSVHTISSTFDRGTEEWSGQTRDGSTVSVQWSPAGQEVSLVSEDY
QPLYLVAPEKFLRNQMLSYGQNLSMTFRVERRDARLSAEDLILEGAGMRLAVPLIAQGNA
YPNENMQTFVFRLHEQPGYPWRPAISDSDFQKLLHNLTAIKIRGTYSERSAGYLDNVSLV
TARRGSGVPARWVERCSCPPGYQGQHCEQCTLGYRRAQRELGPFSSCEVCNCHGHSDACH
PDTGACDCQDNTAGLSCERCKDGFYGDATQGAAGDCRPCPCPGGATCAVVPKTREVVCTN
CPAGTTGKRCELCDDGFFGDPLGQNGPARPCRSCQCSNNIDPNAVGNCNRETGECLKCIY
NTDGFFCDRCKAGFFGDPHASNPAEKCAACSCSPLGTVDQQTSCSPVTGQCQCLPNVDER
DCSACQLGFFNLQSGNGCEECNCNPIGSTSGDCDIDSGQCECQPGVAGQHCDRCEVNFFG
FSSSGCKPCDCDHEGSLSGQCKEDGRCECRPGFVGARCDMCEENYFYNRSVPGCQQCPSC
YGLVRDKVNQQRQKLQELQTLIDNLGSGQDTVSDKAFEDRLKEAEKVIMELLAEAQNSKD
ADRGLLDRLNSLNATLTTQWNRLQSIRNTVDGTSAQADRARDRVRDAESLIDRARQELAK
AKDAVSKVDIKPTDGTGEPNNMTLLAEEARRLADKHKLDADQIEKIAKDANDTSTKAYNL
LLKTIDGESKMADDIDKLNKIYNEAKDRAKDLEKQAHKVQAEAEDAGNKALKLFANLTSL
PPFDTKTLEDDAKKIKKEASDLDNLIDKTEREYNELRDDLKPKELEVRKLLEKGKSEQQT
ADQLLARADAAKALAEEAAKKGQSTFKEAENILEDLRDFDRRVNDNKTAAEEAMKKIPVI
NATIMAANEKTRQAKEALGNAASDAGEAKRKAEEAEKIAGNIQKGSAKTKEEAEKALQDT
NKLDKDVDDMMDQLSAAEEELKKKKAEADSDMMMASMASDTAKQAEDNARKAKSTVKTVL
KIITDLMDQLGNIDKVDLSKLNQIDESLKRAKDKMAGSELDKKLRELNDVASTQKQMIDD
YDRQIREIRSDINNLNDIKATLPEGCFNTPSLEQP
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacctgatccgggctctggtggcgtgcagctggctggccgcggtgtgcgtccgc
ggcgccatggatgaatgcgcggacgagcagggccgacagcagcgctgcatgccggagttc
gtgaacgcggccttcaacgtgacggtggaggccaccaacacctgcggctccccgccggag
gagtactgcgtccagaccggcgccaccggggtcaccaagtcctgccacatctgcgacgcg
cgggacccccggaaccaccacaacgccgcgtacctgaccgactacaacaaccagcaggac
gccacctggtggcagagccagaccatgctggcggggatccagtaccccaactccatcaac
ctcaccctacacctcggtaaggccttcgacatcacctacgttcggctgaagttccatacc
agccgtccggagagcttcgccatctacaagcggagcagagagggcggcccctgggtgccg
taccagtactacagcggctcctgcgagaagacctacaggaagccgagccacggcttcatc
cagaccggcggcgacgagcaggaggcgctttgcaccgatgacttcagcgacatctcgccg
ctcaccggaggaaacgtggccttttccacgctggagggccgaccgagcgcctacaacttc
gacaacagcccgatccttcaggactgggtgacggccacagacatcagagtgaccctgaac
aggctcaacacgttcggagacgaagttttcaacgatcccaaggtcctcaagtcctactac
tacgccatctctgacttcgccgtgggaggaaggtgtaagtgtaacggccacgccagcgag
tgtgtgaaggacagcgggggccggctggtctgcgactgcaaacacaacacggagggcgtc
gactgcagcgtgtgcaaagctttcttcaacgaccggccgtggatgagggcgacggccgac
agcgccaacgagtgtctgccctgcgactgtaacaggaagagctcagactgttacttcgac
gccgagctgtaccgggccacgggtcacggaggtcactgcaggaactgcgccgacaacacc
gacgggcccaactgtgagcgttgcctcgacaactaccacagagaccagagcggcaaccgc
tgcctgccctgcaactgcaactccatcggttctgagtctcctcagtgcaacaacagaggc
gtatgcgcctgcaaacccggagtaaccggggagaagtgcgaccgctgccagccggggttc
cacagcctgaccgaggccggctgcaggccttgcagctgctcgccgtcaggcagcacccag
gagtgtgacgtcaacacgggtcagtgccgctgtaaagacaacgtggagggcttcagctgc
gacagatgtaaaccaggttacttcaacttggaccccaacaaccctcagggctgcacagcc
tgtttctgcttccagcactcgtctgtgtgcgacagcgccgaaggctacagcgtccacacc
atcagctccaccttcgacagaggtacagaggagtggagcggccagacgcgggacggatcc
accgtctctgtccagtggtctcccgccggacaggaagtgtccttggtgtctgaagactac
cagcccctgtacctggtggccccagagaagttcctgaggaatcagatgctgagttatgga
caaaacctgagcatgacgttccgagtggagcggcgggacgcccggctgtcggccgaggat
ctgatcctggagggggccggcatgaggctggccgtgccgctcatcgcccagggcaacgcc
taccccaacgagaacatgcagacctttgtgttcaggctccatgagcagccaggttacccc
tggagacctgccatcagtgactccgacttccagaaacttctccacaacctgacggccatc
aagatccggggcacctacagcgagcgcagtgctggttacctggacaacgtctccctggtg
acggcgaggaggggctcaggtgtgccggcccgctgggtggagcggtgctcctgtccgccg
ggttaccagggtcagcactgtgagcagtgcaccctgggataccgccgggcccagcgggag
ctcggacccttcagctcctgtgaagtctgcaactgccatggacacagcgacgcctgccac
cctgatactggagcctgtgactgtcaggacaacactgccgggttgagctgcgagcgctgc
aaggacgggttttatggcgacgccactcagggcgcagcgggcgactgccggccgtgtccc
tgccccggcggagccacctgcgccgtcgtccccaaaaccagagaagtggtttgcaccaac
tgtcctgctggaaccacaggtaagcgctgtgagctctgcgacgacgggttctttggggac
cctctgggtcagaacgggccggcccgaccctgccgctcctgccagtgcagcaataacatc
gaccccaacgccgtcggcaactgcaaccgcgagacaggagaatgcctgaagtgcatctac
aacaccgacggcttcttctgcgaccgctgcaaggcgggcttcttcggagacccgcacgcc
tccaaccctgctgagaagtgtgcagcctgctcctgttctccgctgggcacagtggatcag
cagaccagctgctctccggtcaccggtcagtgtcagtgtctccctaacgtggatgaacgt
gactgcagcgcctgccagttgggattcttcaacctgcagagcggcaatggctgcgaggag
tgtaactgcaacccaatcggctccaccagtggtgactgtgacatcgactcaggacaatgc
gagtgccaacccggcgtcgccggccagcactgtgaccgctgtgaggtcaactttttcggc
ttcagctcctctggatgcaaaccgtgtgactgtgaccatgaaggctctctgtcaggtcag
tgtaaggaagacggccggtgcgagtgtcggcccggtttcgttggagctcgatgcgatatg
tgtgaggagaattatttctacaaccggtcagtgccaggctgccagcagtgtccgtcctgc
tacggtctggtccgagacaaggtgaaccagcagagacagaagctccaagaactccagacg
ctgatagataatctgggctccggccaggatacggtcagtgataaggcctttgaggacaga
ttgaaggaggcagaaaaggtcatcatggagctgctggcagaggctcagaatagcaaagac
gcagaccgaggtctgctggaccgtctgaactccctgaacgccaccctgaccacccagtgg
aaccgactgcagagcatccgcaacacggtggacggcaccagcgctcaggctgaccgcgcg
cgtgacagagtccgagacgccgagagcctgatagaccgagctcggcaggaactggccaag
gccaaggatgccgtcagcaaagtggacatcaaacctaccgatggcactggagagcccaac
aacatgacgctgctggctgaggaggctcgacgcctcgccgacaagcacaagttggatgct
gatcagatcgaaaagatcgctaaagatgccaacgacacgtcaaccaaagcatataacctg
ctgctgaagaccatcgacggcgagagcaagatggctgacgacattgacaagctcaacaag
atctacaacgaggcgaaggaccgggccaaggatctggagaaacaggcccacaaggtgcag
gcggaggcagaggacgccgggaacaaagctctgaagctgttcgccaacctgaccagcctc
ccgccgtttgacaccaagacattggaggatgatgccaaaaaaattaagaaggaggcgtcc
gatctggacaacctgattgacaagacagaacgggagtacaacgagctgcgagacgacctg
aagcccaaagagctggaggtccggaagctgctggagaaagggaagagtgagcagcagact
gcagaccagctgttggccagagccgatgccgctaaagctctagccgaggaggcggcgaag
aaaggccagtcaactttcaaagaagcagagaacatcctggaggacctgcgagactttgac
aggagggtcaacgacaacaagacagcagcagaggaagccatgaagaagatccccgtcatc
aatgccaccatcatggccgccaacgagaagacccggcaggcgaaggaggcgcttggtaat
gctgctagtgacgctggggaagccaagaggaaggctgaagaggctgagaagatcgcaggc
aacatccagaagggctcggctaagactaaagaggaagcagagaaggcgctgcaggacaca
aacaagctggacaaagatgttgatgacatgatggatcagctgagcgccgcagaggaggag
ctgaagaagaagaaggctgaggccgacagcgacatgatgatggcctccatggcgtcggat
accgccaagcaggccgaggacaacgctcgcaaggccaagagtacggtgaagacagtcctg
aagatcatcacggatctaatggatcagctgggaaacattgataaagtggatcttagcaaa
ctgaaccagattgatgagtctctgaagcgagccaaggacaagatggccggcagcgagctg
gacaagaagctgagggagctgaatgatgtggcgagcacacagaagcagatgatcgacgac
tatgaccggcagatccgagagatccgcagcgacatcaacaacctgaacgacatcaaggca
acgttacctgaaggctgcttcaacacgccgtcgctggagcagccttag
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