Xiphophorus couchianus (Monterrey platyfish): 114146197
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Entry
114146197 CDS
T05908
Symbol
mib1
Name
(RefSeq) E3 ubiquitin-protein ligase MIB1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114146197 (mib1)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114146197 (mib1)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114146197 (mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank_5
Ank
SH3_15
MIB_HERC2
Ank_3
zf-C3HC4_3
ZZ
zf-C3HC4_2
Prok-RING_4
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
114146197
NCBI-ProteinID:
XP_027875862
LinkDB
All DBs
Position
6:18351337..18409511
Genome browser
AA seq
1037 aa
AA seq
DB search
MTTGRNNRAMMEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDIRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFAGGRVVRGVDWQWEDQDGGNARRGKVTE
IQDWSAASPHSAAYVIWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGEVTAGAEGGNSQFHVGDLVQICYDIDRIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKIAPSGSAVSNASGERLSQLLK
KLFETQESGDINEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDVL
KLLLKHNVDLEAEDKDGDRAVHHAAFGDEGSVIEVLHRGGADLNARNKRRQTPLHIAVNK
GHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNASLD
IQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQD
MQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLCP
DPSLCKALAKCHKEKSSGQVDTRSPSLNSNIESLEECMVCSDMKRDTLFGPCGHIATCSL
CSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRA
VVERRTPYVLCCGGKGMEDDAADHDDDDDDDDLTGSSNTMAGGSQDLLQPNNLALSWSSG
NIPALQRDKDNTNVNADVQKLQQQLHDIKEQTMCPVCLDRLKNMIFLCGHGTCQLCGDRM
SECPICRKAIERRVLLY
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggcaggaacaaccgggcgatgatggaaggagtcggagccagagtggtccgc
ggacccgactggaagtgggggaaacaggatggtggagaggggcatgtcggcaccgtcagg
agtttcgaaagtccagaagaagtggtcgttgtttgggataacgggactgctgccaactac
cgctgctctggagcttacgacataagaattttagacagtgctccaacaggtatcaagcat
gatggaaccatgtgtgacacatgtcgtcaacagccaatcattggtattcgctggaaatgt
gcagagtgcaccaattatgacctctgcacaacctgttaccatggagacaagcatcacctg
agacaccgattctacaggatcaccaccccaggcagcgagagagtacttctggagtcgcgc
cggaagtcaaagaaaatcacagccagagggatttttgctggtggccgagttgttagagga
gtggactggcaatgggaagaccaagatggaggcaatgcgaggagaggaaaggtgactgag
atccaggactggagtgccgccagccctcacagcgccgcctatgtgatctgggacaacggg
gccaagaacctgtacagagtcggcttcgaaggaatgtcggacttgaaatgtgtccaggat
gccaaaggaggctcgttttacagagaccattgtcctgttttaggtgagcagaatggaaac
agaaatccgggtggtcttcagatcggagacctggtcaacattgatttggatttagagatt
gttcagtccctccagcatggccacgggggatggaccgatggcatgtttgagacgctcaca
accacaggcaccgtgtgtggcatcgatgaggaccatgatattgtggttcagtaccccagt
gggaacagatggacatttaacccagcagtgctaaccaaggccaacgtagtgcgcagtggt
gaagttacagccggagcagaaggaggaaactcccagttccatgtgggagacctggtccag
atctgctacgacatcgaccgtatcaagctgctccaaagaggccatggcgagtgggctgaa
gccatgctgccgaccctgggcaaggtgggccgtgtgcagcagatctactctgacagtgac
ctgaaggtcgaggtttgtgggacttcctggacgtacaatcctgcggctgtcaccaaaatc
gccccctccggctctgctgtcagcaatgcctctggagagcgtttgtctcagttgttgaag
aaactattcgagacgcaagagtctggggacataaatgaggagctggtcaaggcagcagct
aatggagacctggctaaagtggaggacattttgaagagacctgatgtggatgtgaatgga
cagtgtgcgggacacactgctatgcaggcggccagtcagaatggccacgtggatgtccta
aaactgctgctgaaacacaatgtagacctagaggccgaggataaagacggagaccgggcg
gtgcaccatgcagcgtttggcgatgaaggctccgtcatcgaggtgcttcacaggggtggg
gctgacttgaacgccaggaacaagcgaaggcagaccccgttacacatagcagtcaacaag
ggccatctacaggtggttaaaaccttgctggattttggttgccatcctagtcttcaggat
tcggaaggtgacacacctctgcacgatgcaattagcaagaaaagagatgacatgttgtca
gtgctgctggaggccggcgcagatgtcaccatcactaacaacaacgggttcaatgcctta
catcacgctgccctgcgaggaaaccccagtgccatgcgtgtgctgctgtccaaactgccg
aggccgtggatcgtcgatgagaaaaaggacgatggttacaccgcgctgcatctggctgct
ctcaacaaccacgtagaggtggctgaacttctggtgcaccagggcaacgccagcttagac
attcagaatgttaaccagcagacggcattacaccttgcagtggagcgccagcacactcag
atagttcggctgctggtgcgggcagaggctaagcttgacgtgcaggacaaggatggggac
acgccgcttcacgaggcgctacgtcaccacacactgtcccagttgcggcaactccaggat
atgcaggatgtcagcaaagtggagccctgggaaccctccaagaacacattaatcatgggc
ttgggcacccagggagcagagaagaagagcgcagcatccatcgcctgtttcctggcagca
aacggtgcagacctgaccattcgcaacaaaaagggccagtcccctctggacctctgtccg
gaccccagtctctgtaaggccttggccaaatgtcacaaagagaagagtagcggtcaggtg
gacacccgtagcccatctctgaacagcaacatcgagtctctggaagagtgcatggtttgc
tcggacatgaagagagacactctgtttgggccctgtggacacatcgcaacttgctcgctc
tgctcgccgcgtgtcaagaagtgtctcatctgtaaggagcaggttcagtccagaacaaag
attgaggagtgcgtagtttgctctgacaaaaaggccgctgtgttgttccagccctgtggt
cacatgtgcgcttgtgagaactgtgccagcctcatgaagaagtgcgtacagtgccgggct
gtggtggaacgccgcaccccctacgttctctgctgcggagggaaaggtatggaggatgat
gccgctgatcatgatgatgatgatgatgatgatgaccttacagggagctctaacactatg
gcagggggatcccaggatcttctccagcccaacaatctggcattaagttggtcgagtgga
aacatcccagccctgcagagggataaagataacacaaacgtaaacgctgatgtgcagaag
ctacagcaacagcttcatgacattaaggaacagacgatgtgtccggtgtgtctggaccgg
ctgaagaacatgatcttcttgtgcggccacggcacctgccaactttgcggagaccgaatg
agcgagtgcccaatctgccgcaaagccatcgagcgccgggtcctcctctactag
DBGET
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