Xiphophorus couchianus (Monterrey platyfish): 114146549
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Entry
114146549 CDS
T05908
Name
(RefSeq) vesicle-trafficking protein SEC22b-like
KO
K08517
vesicle transport protein SEC22
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04130
SNARE interactions in vesicular transport
xco04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
114146549
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114146549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114146549
Membrane trafficking [BR:
xco04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
114146549
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
RIFIN
Sec20
DUF3785
Motif
Other DBs
NCBI-GeneID:
114146549
NCBI-ProteinID:
XP_027876521
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Position
6:complement(3439704..3442269)
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AA seq
215 aa
AA seq
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MIFLTVIARLADGLPLAASIQEDEQSGRDLQHYQSQAKQLLRKLDAQSPDRCMLEAGNMN
FCYFISQGVCCLCLCDASFPKKMAFGYLEDLHNEFCEQYGKRVPAVTRPYSFIEFDTYIQ
KTKKSYVDSRARRNLSSVSTELQDVQRIMVANIEEVLQRGEALSALDTKASNLRSQAEKY
RSDARFLNTRSTYAKVAAVVLVFVTLIIYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcctgacggtaatcgctcggctggcggacggtctgccgctggctgcgtccatc
caggaagatgaacagtcaggaagagacctccagcactaccagagtcaggccaagcagctg
ctccggaaactcgacgctcagagcccggaccgctgcatgctggaggctgggaacatgaac
ttctgttacttcatatcccagggtgtttgctgcctgtgtctctgtgatgcctctttcccc
aaaaagatggcttttgggtacctagaggacctccataatgaattctgtgagcagtatgga
aagagagtccctgcagtgacgaggccatactccttcatagagtttgatacgtacatccag
aaaacaaagaagtcttacgttgacagcagggctcggaggaacctgagcagcgtcagcacg
gagctgcaggacgtccagagaattatggtggcaaatatcgaggaagtcctgcagagagga
gaagctctttctgctttggacaccaaggccagcaacctgcgcagccaggccgagaagtac
cgcagcgacgccaggttcctcaacacccgctccacctacgctaaagtcgctgccgtggtt
ttggtcttcgtgacgctcatcatctatgtgcgcttttggtggctttga
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