Xiphophorus couchianus (Monterrey platyfish): 114147495
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Entry
114147495 CDS
T05908
Name
(RefSeq) ras-related protein Rab-33B-like isoform X1
KO
K07920
Ras-related protein Rab-33B
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114147495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114147495
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114147495
04031 GTP-binding proteins [BR:
xco04031
]
114147495
Membrane trafficking [BR:
xco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
114147495
Others
Rab GTPases of specific organelles
Auto phagosome
114147495
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
114147495
GTP-binding proteins [BR:
xco04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
114147495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
SRPRB
G-alpha
TniB
Motif
Other DBs
NCBI-GeneID:
114147495
NCBI-ProteinID:
XP_027877741
LinkDB
All DBs
Position
7:10520089..10523697
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AA seq
234 aa
AA seq
DB search
MAIENKPEEEFDTVFNLNDSLELSAHSERDCGKARIFKIIVIGDSNVGKTCLTYRFCGGT
FLKNPEATIGVDFRERTVVLDGETIKLQIWDTAGQERFRKSMVEHYYRSVHAVIFVYDVT
NLPSFESIPEWIEECSKHSVGPLVPRIIVGNKCDLREHRQVPASAAHCLADSYNFPLFET
SAKDAAEKEHVDAIFLTLAYRLKSHKPLRLKQLSESSVRELRNQREQETTFCQC
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagaaaacaaaccagaggaagaatttgacacagttttcaacctgaatgattcc
ctggagctctccgctcattcagagcgtgactgtggaaaggcacgaatcttcaagataata
gtcataggagactcaaacgtggggaagacgtgtctgacttaccgcttctgcgggggcact
ttcctgaaaaacccagaggcaactatcggggtggatttcagggagaggacggtggtgctg
gacggagagaccatcaagttgcagatttgggacacagcgggtcaggagcgtttcaggaag
agcatggtggagcactactaccgcagcgttcacgccgtcatctttgtgtatgacgtgacc
aatctgccgtccttcgaaagcatccccgagtggatcgaagagtgcagcaaacactccgtg
gggcccctggtgccgcgcatcatcgtgggaaacaaatgtgacctgagggaacatcggcag
gtgcccgcctctgccgctcactgtcttgccgacagctacaacttccccctattcgagact
tcggccaaagacgccgctgagaaggagcatgttgacgccatcttcctgactttagcttat
cggctgaagagccacaagcccctgagactgaagcagctgagtgagagctctgttagggag
ctgaggaaccagagagaacaggaaacgacattttgtcagtgctaa
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