Xiphophorus couchianus (Monterrey platyfish): 114151325
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Entry
114151325 CDS
T05908
Symbol
sec22b
Name
(RefSeq) vesicle-trafficking protein SEC22b isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04130
SNARE interactions in vesicular transport
xco04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
114151325 (sec22b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114151325 (sec22b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114151325 (sec22b)
Membrane trafficking [BR:
xco04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
114151325 (sec22b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
IMD
Sec20
Motif
Other DBs
NCBI-GeneID:
114151325
NCBI-ProteinID:
XP_027884267
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All DBs
Position
9:15993718..15999577
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AA seq
219 aa
AA seq
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MLLLTMIARLADGLPLAASMQEDEQGSEKVGRDLQQYQTQAKQLFRKLNEQSPTRCTLEA
GTMAFHYFIEQGVCYLVLSEASFSKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFD
TYIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSL
SKKYRSDAKYLNTRSTYAKLAAGGVFFIMLIVYIRFWWL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgctgacgatgatcgctcggctggctgacggtctgccgctggccgcttcaatg
caggaggacgagcagggaagcgagaaggtgggtcgagaccttcagcagtaccagactcag
gccaagcagcttttcaggaaactcaacgaacagagtcccacacgctgcaccttagaggct
ggaacgatggcgtttcactatttcatagaacaaggagtttgctaccttgtgctgtcggaa
gccagcttttccaagaagctagcctttgcgtaccttgaagacctgcaggcagagtttcat
gagcagcacggaaagaaggtccccacagtgtcccgtccttactccttcatcgagtttgac
acctacattcaaaaaaccaagaagttgtacatcgacagccgagccagaaggaacctgggc
agcatcaacactgagctgcaggacgtgcagaggatcatggtggcgaacatcgaggaggtc
ctgcagagaggggaggcgctctctgcactagactccaaggccagcaacttgtccagcctg
tcgaagaaatacaggagcgacgccaaatacctgaacacccgctccacttacgccaagctg
gcagcagggggcgtctttttcatcatgctcatcgtttacattcgtttctggtggctctga
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