Xiphophorus couchianus (Monterrey platyfish): 114151583
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Entry
114151583 CDS
T05908
Symbol
lingo3
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114151583 (lingo3)
Membrane trafficking [BR:
xco04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
114151583 (lingo3)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_6
LRR_9
V-set
LRRNT
Cupin_1
Motif
Other DBs
NCBI-GeneID:
114151583
NCBI-ProteinID:
XP_027884691
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Position
9:16427284..16470591
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AA seq
608 aa
AA seq
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MGVGLGVCWLLPFLFLLLMITVSSTQSQGCPQRCDCIAKLKTVSCFGKRLSSLPEGIPPD
TKVLDLSGNKLRWIEQDDLLPYTRLEKLELSDNMISVLEPNAFSSLQNLQSLSLRGNQLK
LVPMGAFSRLSNLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGLVG
LKELTIERCNLTSVSSQSLSYLHNLVNLRLRYLSISSLDDQNFRKLGNLRGLEIDHWPFL
EYISPHSLRGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPITVLESWGLRDLIR
LKELHLVNTNLAVVQPYALGGLRQIRLLNLSTNSLVTLEEGAFQSVNTLETLRLDRNPLA
CDCRLLWILQRRKTLNFDGASPVCMTPVEVQGRALSAFTDSALFDHFTCQKPKIRNRKLQ
QISAREGQVVSFICRAEGEPTPVIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVTDS
GTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTLDL
KTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGA
RKFNMKMI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggggttggcctgggcgtatgttggctgctgcctttcctcttcttgctgcttatgatc
acagtgtcctccacccaaagtcaaggatgtccccagcgttgtgactgcattgcgaagctg
aagactgtgtcctgttttggtaaacgtctgtcctccttgccggagggaatcccgcctgac
accaaagttttggacctaagtgggaataaacttcgctggatagaacaggatgatctgctt
ccatatacacgcctggagaagctggaactcagtgataacatgatcagtgtcctggagcca
aatgctttttcaagtcttcagaacttgcagtcactttcactgaggggtaaccagctaaaa
ctggttcccatgggagctttctcgcgtctctccaacctcacctccttagatttgagtgga
aataagattgtaattcttttggacttcactttccaagacctaaaaagtcttaagaacctg
gaggttggtgacaatgatctggtttacatttctaacaaggcttttctgggattagtagga
ctcaaggagctgacaattgagagatgcaacctgacgtcggtgtccagccaatcattatcc
tatctgcacaacctggtgaatctgcgactcaggtatcttagcatctcctccttagacgac
cagaactttcgaaaacttggaaaccttagaggtctggagattgatcattggccctttttg
gaatatatctcccctcatagccttcgaggccttaatttgtcttggctgtccattactcac
accaacatcacctctgtgcccacctctgcccttcgtagtttggctcacctcactagcctc
aacctttcctataatccaatcactgtgttagagtcctggggtctgcgggatctcatcaga
ctgaaggagttgcatctggtgaacaccaacctggcagtagttcaaccttatgcactaggt
ggtctgaggcaaatccgccttcttaatctttcaaccaacagcttagtgaccttggaagag
ggagcctttcagtcagtcaacactcttgagacgctgcgcttggatagaaaccctcttgcc
tgtgactgccgcctcctctggatccttcagcgtaggaagacccttaattttgatggtgcc
tcccctgtgtgtatgacccctgttgaagtccaaggccgggctcttagtgctttcaccgac
tcagctctttttgaccactttacttgccagaaacctaaaattcgcaacaggaaactgcag
caaatttcagcccgcgaagggcaagtagtgtcgtttatctgcagagcagaaggtgagcca
acgccggtgatattctggatttctcctcagcgtcgacgcataaccacaaagagcagtggg
cgactgactgtgttaccagagggcactctagaaatacgctacgcccaggtaactgatagt
ggaacctacatctgcatcgctagcaatgctggtggaaatgacacctactttgctacgctc
acagtcagtgggctaccactggatgcagcactcatggccaaccgcacctattatgccggg
gaccttaacgacacaaatctgaatgacaccagggtgttcttgaagttcacccttgacctc
aagaccattctaatatctacagctatgggctgtatcatgtttctgggagtggtcttgttc
tgctttatcctgctatttgtgtggagtcggggtagaggacagcacaaaaacaacttctcg
gttgaatattctttcagaaaagtggacggaccagcagccagcggaggacaggggggagca
cgaaagttcaacatgaaaatgatttga
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