Xiphophorus couchianus (Monterrey platyfish): 114152177
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Entry
114152177 CDS
T05908
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04137
Mitophagy - animal
xco04144
Endocytosis
xco04145
Phagosome
xco04148
Efferocytosis
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114152177
04145 Phagosome
114152177
04137 Mitophagy - animal
114152177
04148 Efferocytosis
114152177
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114152177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114152177
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114152177
04031 GTP-binding proteins [BR:
xco04031
]
114152177
Membrane trafficking [BR:
xco04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
114152177
Endosome - Lysosome transport
114152177
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114152177
Exosomal proteins of other body fluids (saliva and urine)
114152177
Exosomal proteins of colorectal cancer cells
114152177
Exosomal proteins of bladder cancer cells
114152177
GTP-binding proteins [BR:
xco04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
114152177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
114152177
NCBI-ProteinID:
XP_027885769
LinkDB
All DBs
Position
10:complement(2593285..2603305)
Genome browser
AA seq
223 aa
AA seq
DB search
MAGRGGGANRPNGAAAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKEL
QRQASPNIVIALAGNKADIADKRAVEFQEAQTYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKSEPQGGAGQGGRTRTGVDLQEATPAGRGGGGGGCCGGH
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgcggcggtggagcaaatcggcctaatggtgctgcggcggcaaacaaaatc
tgccagttcaagctggtgctgctgggggagtcggctgtgggcaagtccagcttagtgctg
cgcttcgttaaaggccagttccacgaattccaggagagcacaatcggagctgcgttcctc
actcagacggtctgtctggacgacaccactgtgaagtttgagatttgggacacagcgggt
caggagcgataccacagcctcgccccaatgtactacagaggcgcacaggcagccatcgtg
gtttacgacatcaccaacacagacacatttgcacgtgcaaaaaactgggtgaaggagctt
cagaggcaagccagtcccaacatcgtgatcgctctggcaggcaacaaggcagacatcgct
gacaagagagcagtggaatttcaggaggcgcaaacatacgctgacgacaatagtctgctc
ttcatggaaacttcagccaagactgcgatgaatgtcaatgaaatttttatggccatcgca
aagaagcttccaaagagtgagcctcagggcggagcaggacaaggcgggcggacaagaacc
ggggtggatctacaagaggcgacccccgcaggccgcggcggcggcggcggcggctgctgc
ggcggccattag
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integrated database retrieval system