Xiphophorus couchianus (Monterrey platyfish): 114152323
Help
Entry
114152323 CDS
T05908
Name
(RefSeq) putative upstream-binding factor 1-like protein 6 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114152323
03021 Transcription machinery [BR:
xco03021
]
114152323
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
114152323
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
114152323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HSNSD
NDUFB10
Motif
Other DBs
NCBI-GeneID:
114152323
NCBI-ProteinID:
XP_027885973
LinkDB
All DBs
Position
10:232632..240793
Genome browser
AA seq
512 aa
AA seq
DB search
MKMSEAAIEDGESGAESTGWTQENLQKLVASLKDTVPENDKTQTYGHGLKAVDWDKVAFP
PFSAGECHEKWNSLMRKMRRCRSLPDLLDEAEDLLSNPFCDKNIHPDLPKPPDPPKIAYI
RKKITRYARKNPGVNVRLMRKTFSKKYEKLSDEKKAKYAKKYSVAFEEYSRNIQTFCKDN
NLHLPIKENEKEKKKKKKKQKKKKKKKKGRIFPEDEGEGCSKYKGLPQKPPGNGYTLFLI
EHSAAGKGGETSHGASFIRVMSQHWKELSENEKQKYNKRCAEMKKNYEETLMNYLGKLNE
EEKKQIIEEKGIKIPKKTPDRYIRLPGEPKMPPQSGFIYFHSDMLKHAWKSIPRKERMAR
AKKEWHELSEREKNRYAEIIEENMRKYTEELRAWFQTLTQKDQMVYLKKKPDKVIFLQKH
IDAIEDSHNLSSDVKDEKTSRTKGRRRKKKLLRAKLKRMATGSRRMIDYKSRWRILNQLV
SMMDARKKTPPRRGGAVLTFCRLADAELKFMH
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgagcgaagcagcaattgaagatggtgaatcaggggctgaatctacaggatgg
acgcaggaaaacctccagaagctcgttgcttctctgaaagacaccgtcccagagaatgac
aaaacgcagacttatggtcatggattgaaagctgtagactgggataaagttgcattcccc
ccgttttctgcaggtgaatgccatgagaaatggaacagcctgatgaggaagatgcgcaga
tgtcgcagccttcctgatctccttgatgaagctgaagatttgctttcaaaccccttctgt
gacaaaaatattcacccagacctcccaaaaccgcctgatcctccaaaaattgcttatatt
aggaagaaaattaccaggtatgcgaggaaaaatccaggggtgaacgtacggttaatgaga
aagaccttttccaagaagtatgaaaaactctcagacgaaaagaaagctaaatatgcaaag
aagtacagcgttgcatttgaagaatacagcagaaatatacagaccttctgcaaagacaac
aatctgcatcttcctataaaggagaatgagaaggagaagaagaagaagaagaagaagcag
aagaagaagaagaagaagaaaaagggaaggatcttccctgaagatgaaggtgaaggatgc
agtaaatacaaaggtcttcctcagaaaccacctgggaatggttatactctgttcctcata
gaacactctgcagcaggcaaaggaggcgagacttcacatggagcgagttttattcgggtt
atgagtcaacactggaaagaattgagtgaaaatgagaaacagaagtacaataaacgctgt
gcagagatgaagaaaaactacgaagaaacgctgatgaactatctgggtaagttaaatgag
gaggagaagaagcagatcattgaggaaaaaggaatcaaaatcccaaagaagactccggac
cgatacatcagactaccgggtgagccgaagatgcccccccaatctgggtttatatatttt
cactcggatatgttgaaacatgcctggaaatctataccaagaaaagagcgtatggcaagg
gccaagaaagagtggcacgagctctcagaaagggagaagaatcgatatgctgaaataatt
gaggaaaatatgagaaaatacacagaagagctgcgagcgtggttccagacgctgactcaa
aaggatcagatggtttacttgaagaaaaaacctgataaggttatttttctccagaaacat
atagacgccatagaggattctcataacctatcttcagacgtaaaggatgagaagacaagt
agaacgaaaggacgtagaagaaagaagaaattgttgagagcgaaactaaaaaggatggca
acaggttcgaggcgtatgattgattacaaatccagatggaggattctcaaccaactggtt
tctatgatggacgccaggaagaaaacgccacccaggagaggcggtgctgtgttaactttc
tgcaggttggcagatgcagagctgaagttcatgcactga
DBGET
integrated database retrieval system
