Xiphophorus couchianus (Monterrey platyfish): 114153029
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Entry
114153029 CDS
T05908
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00562
Inositol phosphate metabolism
xco01100
Metabolic pathways
xco04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
114153029 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
114153029 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114153029 (synj1)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
114153029 (synj1)
Membrane trafficking [BR:
xco04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
114153029 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syja_N
DUF1866
CFIA_Pcf11
Motif
Other DBs
NCBI-GeneID:
114153029
NCBI-ProteinID:
XP_027887059
LinkDB
All DBs
Position
11:complement(28380825..28411236)
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AA seq
1673 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRAREECLMFESGAVAVLSAAEKDAIKSTYTRIFDAY
GILGVLRLNLGDSMLHSLVVVTGCSSVGKVQDSEVFRVTQTDFISLKNDPGDEDRISEVR
KVLNSGHFYFAWSATGISMDLSLSAHRRILEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACIFSRLSSERAGTRFNVRGTNDDGQVANFVETEQVIFLD
DKVSSFIQIRGSIPLFWEQPGIQKKSIKGVLLHLNENRHPNGLDENPHLVGSHRVKLSRG
FEANAPAFERHFTALRSLYGKQVIINLLGSKEGEHMLSKAFQSHLKASEHATAVRMVNFD
YHQNVRGGKTDKLSSVLKPQLSKFIDECGFFYYSGEKGIVRTQGGTIRSNCLDCLDRTNS
VQAFFALEMLPRQLEQMGLTEKPQLVARFQEVFRTMWSANGDSVSKIYAGTGALDGKAKA
GKLKDGARSVTRTIQNNFFDSSKQEAIDILRLGSTLNSDLADKARALLTTSSLYVTEPVL
QSASPRVLLGMCQSHHKYTKPKQIRVCVGTWNVNGGKQFRSIAFRNQTLNDWLLDAPKKA
GHPEFQDSKANPIDIFAIGFEEMVELNAGNIVSASTTNQKLWAAELQKNISRDHKYVLLA
SEQLVGVCLFVFIRPQHAHFIRDVAVDTVKTGMGGATGNKGGVAIRLLFHTTSICFVCSH
FAAGQSQVKERNDDYNEITRRLSFPMGRLLYSHDYVFWCGDFNYRINLPNEEVKELIKQQ
NWDALTAGDQLLEQKNTGMIFRGFIEGNLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRIL
WKRRKWNFNRTAEEMNVVGAASTSGDAEDNPEQAWSPGTLKYYGRAELKTSDHRPVVAVI
DVDILEVDPEERHQVYKDVIALQGPPDGTILVSLCSSGPDDYFSDELIDELLDKFANFGE
VILIRFVEEKMWVTFLEGYSALAALSLSGSSVLDKVIDIRLRSSGWIKSLEEEMSVERIC
GSIPTSASSTLLAEDVDVGDEDYDMEGDVDDEVEDILPQHLQPGAGSSLGSSPLPSPRGS
PCPSPTHGEPAAPNRPSRGQQPLRPSQGPPVDFQPGAPTGTGLEPKRPPPPRPNAPPARP
APPQRPPPPSDSGKCPSPLLGRRGSEGPKSPALPRPDAPAGRGQAGAPAPGGASRPNLPP
RAGVISMPPQSRPQPPSHPGAPRPTPDVHPGAPRPIPDSHPGAPRPVPSAQVKPPDLPLG
PPPSGPPPTTKAQTQSPMQPQPAPPSAQSQLPPPLQPSLPAPLQPQAAPPAASTPPAAVC
PGLQQGLSSPKPPPRSRSSHALPPDAAKAESAPAAQTNGLNGFQREAQWKPDPFDSLTSN
MFSSSSSSRHTTQSLNRGSSLHSPPSVPLSVHSSSTLPSSLSFVLSDLQSLSSSSSSSFS
TPSPSATLLLPPPPTPSRSRSQEILRASPNLFQSEPLPARPSSTNPFTGPLVQQPLPHRS
LTPDFSLQHPTQTADFQRTLSALSQPLVPTLAAAPSSQHSQTVSLFGPSSSPPPTQASLL
PIDPSPALTLPLALPSSLPPAFAPRSQPPPPSRGNQQKQWVTFDDDSKFSTATKTQQNPM
FLSSSFVPQTQTQSTRSVFDSEPEWLSTHIPNRTVTGNLNSPQGPTNNGFFPR
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagcaaaggataccgtatttaccacaagctggatccaccaccttacagtgtc
atagtggaaacgagggcgagggaagaatgcctcatgtttgaatcaggagctgttgccgtt
ttgtcggcggcggaaaaggatgccattaaaagtacttataccaggatctttgatgcatat
ggaatccttggtgttctccggctaaacctgggggactccatgctccacagtctcgtggtt
gtgacaggatgcagctctgtggggaaggtgcaggattcagaggtcttcagggtcacgcag
acagactttatatcgctgaagaacgatccaggtgatgaggaccggatttccgaggtgcgc
aaggtcctgaactcgggacacttctactttgcctggtctgctactggaatcagcatggat
ctaagtctcagtgcgcatcgcaggatcctggaagatactacagacaaccgcttcttttgg
aaccagtctctgcacttgcaccttaaacactatggagtaaactgtgatgactggctgctg
aggctgatgtgtggcggcgtagagatcaggaccatctatgccggccacaaacaggccaag
gcttgcatcttttctcgcctcagctcggagcgagccggcacgagatttaatgtgcgagga
acaaacgatgacggacaggtggccaactttgtggagactgaacaggttatcttcctagat
gataaagtctcatcattcatccagatccgagggtccattcctcttttctgggaacagcca
ggaatccagaaaaagtccattaagggtgttttgttgcacctcaatgagaatcgacaccct
aatggactggatgaaaacccccacctggtggggtcccatcgtgtcaaactctcaagggga
tttgaggcaaatgcaccagcttttgaaagacacttcactgcactgcgaagtttatatgga
aagcaggtgatcatcaacttgcttggaagcaaagaaggggaacatatgctcagcaaagca
tttcagagtcacctgaaggcttcagaacatgccacagcagtgagaatggttaactttgac
tatcatcaaaatgtgcggggtggcaagactgataaactcagcagtgttctgaaaccacag
ctgagtaaattcatagacgagtgtgggttcttctattactccggggaaaaaggcattgta
aggactcagggagggaccatcaggagtaactgcctggactgtttggatagaaccaacagt
gttcaagccttctttgcacttgagatgctgcccagacagttagaacaaatgggtctgaca
gagaaaccacagctggtggcccggttccaggaggttttcaggaccatgtggtctgctaat
ggggactccgtcagtaagatttatgcaggaactggagccctggatgggaaggccaaggct
ggaaagctcaaagatggagctcgctctgtgacacggaccatccagaacaacttcttcgac
agctctaagcaggaggcgatagacatcttgaggctgggatccacgcttaacagtgattta
gcagacaaagctcgagccttgctcaccacttccagtctttacgtcactgagcctgtctta
caatcagcctctccaagagtgttgctaggaatgtgtcagagtcaccataaatacacaaag
cccaagcaaattcgggtctgtgtcggcacgtggaacgtcaacgggggcaagcagtttcgc
agcattgcatttcgcaaccagacactgaacgactggctgctggatgctccaaaaaaggca
ggacatcccgagttccaggacagcaaagccaaccccatagatatctttgccattggcttt
gaagaaatggttgaactgaatgctgggaacattgtcagtgccagcactactaaccagaaa
ctgtgggctgctgagctccaaaaaaacatttcaagggaccacaagtatgtgctgcttgct
tctgagcagctggtgggagtgtgcctgtttgtttttatccgtcctcagcatgcacacttc
atcagagatgttgctgtagatacagtgaaaaccggaatgggcggggccaccggtaataag
ggaggtgtcgccatccgcctgctgttccacaccaccagcatctgcttcgtctgctcccac
ttcgctgccggccagtctcaggttaaagagaggaatgacgactacaatgagatcactcgc
agactcagtttcccaatgggtcgtctgctgtattcacacgattacgtgttctggtgcgga
gactttaactaccgaatcaacctgcccaacgaggaagtgaaggagctcatcaagcagcag
aactgggatgctttaacagctggtgatcagttgttggaacagaagaacacaggaatgatc
ttccgaggtttcattgagggaaacctggattttgcccccacctacaagtatgacctcttc
tcagaagattatgacacaagtgagaagtgccgcacaccagcatggactgaccgcatactt
tggaaaaggagaaagtggaactttaacagaacagctgaggagatgaacgttgtaggtgca
gcctctacatctggagatgctgaggataatccagaacaggcctggagccctgggacttta
aagtactatggcagggctgagctcaagacctcagatcacaggcctgtggtagcagtaata
gatgtggacatcctggaggtggaccctgaggaacgacatcaggtctacaaagatgttatt
gccctgcaggggcctccagatggcaccatcttggtgtccctctgctcctcagggcctgat
gactattttagtgatgaactcattgatgagctgcttgataagtttgctaattttggagaa
gtcatcctcatcaggtttgttgaggagaaaatgtgggtaaccttcttggaaggttactct
gctctggctgcactctctctcagtggttcctctgtcctggacaaggtgattgacatccgc
ctgaggagttcagggtggatcaagagtttggaggaggaaatgagtgtggaaaggatctgc
ggcagcattcccacttcagctagttcaaccttgcttgctgaagacgtggacgtgggtgat
gaagattatgatatggaaggtgatgtggatgatgaagtggaagacattcttccccagcac
ctgcagcctggagcaggctcttctcttggatcctcacctctgccgtccccacgcggtagt
ccctgtccctctcctactcatggagaacccgctgctcccaatagaccaagtcgtggacaa
caaccccttcgaccatcacaagggcctcctgtagacttccagcctggtgctcccacaggt
acaggcctggagcccaagcggcctcctccacctcggcccaacgctcctccagccagacca
gctccacctcaacgcccaccaccaccttcagacagtggcaaatgtcccagcccactgctt
ggtaggagaggcagtgaaggaccaaagagccctgctcttcctcggccagatgctcctgca
ggtcgaggtcaggcaggagctccagcacctggaggagcttccagaccaaatcttcctcct
cgagctggagtgatcagcatgccccctcagtctcgccctcagcctccatctcacccgggt
gcaccgcggcccactcctgatgtgcatcctggagcccctcggcctatcccggacagtcac
cccggagccccacggccggtgcccagtgcacaagttaaaccaccagaccttcccctgggt
cccccaccatcaggaccgccccccacaacaaaagcccagactcagtcacccatgcagcct
cagccagctcccccatctgctcagtcgcagctgccaccaccattgcagccctcacttcct
gctcctctgcaaccacaagcagcgccgcctgctgcatctaccccacctgctgcagtgtgt
cctgggcttcagcagggcctatcctctcctaagcctccaccacgctcccgatcttctcat
gctttgccacctgatgctgccaaggctgagtctgccccagctgcacagaccaacggacta
aatggattccaaagagaagcacaatggaagcctgatccctttgactctcttacatccaac
atgttctcgtcttcatcatcatccaggcacaccacccagtccctaaacagaggctcctct
ctgcactctccaccctctgttcctctatctgtacattcctcctctactctcccctcgtcc
ttgtccttcgttttgtcagacctccaatccctgagctcatcctcctcatcctcattctcc
accccgtcaccgtcagccaccctgctgcttccgcctcctccgaccccgtctcgcagccgc
tcccaggagatcctgcgtgcttccccgaatcttttccagtctgagccgctccctgcccga
cccagcagcaccaatcccttcacaggacccctggtccagcaaccgctgccacatcgttcc
cttaccccagacttcagcctccagcatccaacccaaacggctgactttcagaggactctg
tctgctctttctcaaccacttgtccccacccttgcagccgcaccttcctcccagcacagt
cagaccgtgtctttgttcggaccgtcatccagtccccctcctactcaagcttctctgctt
cctattgatccgtctcctgccctcactttaccgctggcgctgccctcttcccttcctccc
gctttcgcgcctcggagccagccgccgcctccctcaagagggaaccaacagaagcagtgg
gtcacttttgatgatgattcgaagttttccacagcaaccaaaacacaacagaaccccatg
ttcttgtccagttcctttgtgccccaaactcaaactcagtcaacccgctctgtgtttgac
tccgagcctgagtggttatccactcacatcccaaacagaactgtaaccggtaacctgaac
tccccacagggtcccaccaacaatggcttttttcctaggtag
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