Xiphophorus couchianus (Monterrey platyfish): 114153796
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Entry
114153796 CDS
T05908
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114153796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114153796
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xco04031
]
114153796
Membrane trafficking [BR:
xco04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
114153796
GTP-binding proteins [BR:
xco04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
114153796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
GTP_EFTU
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
114153796
NCBI-ProteinID:
XP_027888365
LinkDB
All DBs
Position
11:2374210..2378714
Genome browser
AA seq
213 aa
AA seq
DB search
METIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHNWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVTQHEAEKLAGAYGMRYVETSARDAINVEKAFVDLTREIFELVRSGDI
QIQDGWEGVKSGFVPNMVHSSEEVTKGSRQCFC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggagacaatatggctttaccagttccgtctgatcgtcatcggagactccacagtgggc
aagtcatgtctgatccggaggttcacagagggccgcttcgcccaggtgtcagaccccact
gtgggcgtggatttcttctctcgcctggtggagatcgagccgggaaaaaggatcaaactt
cagatctgggacactgcaggacaagagaggttcaggtccattaccagagcctactaccgt
aactccgtgggcggccttttgctctttgacatcacgaaccgccgctccttccagaacgtc
cataactggctggaggaggcgcgaagtcacgtccagccacacagcatcgtcttcctgctc
gtcggccacaagtgtgacctagaggcccagcgtcaggtgacccagcatgaggcggagaag
ctggcaggggcctatgggatgcgttatgtggagacttcggcacgggatgctattaatgtg
gagaaggcgtttgtagatttgacaagggaaatatttgagctggtccgaagtggggacatc
cagatccaagatggctgggaaggagtaaaaagtggatttgttcccaacatggtccattcc
tccgaagaagtcaccaaagggagtcggcagtgtttctgctga
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