Xiphophorus couchianus (Monterrey platyfish): 114156893
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Entry
114156893 CDS
T05908
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114156893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114156893
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114156893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_2
zf-met
zf-C2H2_8
zf-Di19
LIM
DUF3785
Motif
Other DBs
NCBI-GeneID:
114156893
NCBI-ProteinID:
XP_027893293
LinkDB
All DBs
Position
14:22257560..22281086
Genome browser
AA seq
609 aa
AA seq
DB search
MSSVPPQREFINEQVTPAGETFTEFKEINVKMEEEMEDQRRLMDFTRIPRIILHRIEWKE
INVKMEEEMEDQRRLMDFTRIPRIILHRIEWKEINVKMEEEMEDQRRLMDFTRIPRIILH
RIDFLQNFVCKEEDVLNELSNQKENSTLHQEDPEPLQIKQEQEEPEPLQIKQEPDNPEPL
QIKQEPDNPEPLQIKQEPDNPEPLQIKQEPDNPELLQIKQEQEEPEHQEYKEEEKQLCIS
QDEEHLVLKQETDDILVNPSDVAKKMHKKAHPEKKKYSCKICDETFSRKSFLTKHMVIHT
RKKPFTCSTCEKGYSQKRGLMYHMKTHTGEKPFKCVTCGKGHHQKSALKSHMRSHSVEKP
FLCITCGKNFNDKTILENHMRIHMGGKPFSCTSCEKSFSNNQSLVVHMRIHTGEKPFSCM
TCGRGFSQKGNLGIHMKGHTGEEPLSCTACGKRFLTKSCLNIHMRIHTGEKPFSCTTCEK
RFAYKHTLTNHMRIHTGEKPFVCVICGKGFAQKGGLVTHTKGHMGERPFNCNTCGKRFSQ
STLLATHMTTHMDEKHFSCGTCGKSYSKKKSLTYHIRIHTGERPFSCATCGKSFRGKSNL
RYHMRTHTR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagttccgcctcagagagagtttatcaacgagcaggtaactcctgctggagaa
acattcacagagtttaaagaaatcaacgttaagatggaggaagagatggaggatcagcgc
agactgatggattttacccggataccgaggatcatcttacaccggatagagtggaaagaa
atcaacgttaagatggaggaagagatggaggatcagcgcagactgatggattttacccgg
ataccgaggatcatcttacaccggatagagtggaaagaaatcaacgttaagatggaggaa
gagatggaggatcagcgcagactgatggattttacccggataccgaggatcatcttacac
cggatagattttctccaaaactttgtgtgtaaagaggaagacgttctcaatgagctcagc
aaccagaaagagaactccactttacatcaagaagatccagaacctctgcagataaaacag
gagcaagaggaaccagaacctctgcagataaaacaggagccagataatccagaacctctg
cagataaaacaggagccagataatccagaacctctgcagataaaacaggagccagataat
ccagaacctctgcagataaaacaggagccagataatccagaacttctgcagataaaacag
gagcaagaggaaccagaacatcaagagtacaaagaggaagagaagcaactctgcatcagt
caggatgaagagcatcttgtgctgaaacaggagactgatgacattttagtgaatccttct
gatgtggcaaaaaaaatgcacaagaaagctcacccagagaaaaaaaagtattcttgtaaa
atttgtgatgaaaccttttctcgaaagagtttcttgactaaacacatggtaattcacaca
agaaaaaagccttttacatgttcaacctgtgaaaaaggttacagtcaaaaacgtggttta
atgtatcacatgaaaactcacacaggtgaaaaaccgttcaaatgtgttacttgtggaaaa
ggtcaccatcaaaaaagtgccttaaagagtcacatgagatctcactcagttgagaagcct
ttcttgtgcatcacctgtggaaaaaatttcaatgacaaaacaatcttagagaatcacatg
agaatacacatgggtgggaagcctttctcgtgtacgtcctgtgaaaaaagtttttccaat
aaccaaagtttagttgttcacatgagaattcacacaggagagaagcctttctcgtgcatg
acatgtggacgaggtttctctcaaaaaggtaatttaggtattcacatgaaaggtcatacc
ggagaggagcctctctcatgcactgcttgcggaaaacgtttccttaccaagtcttgttta
aacattcatatgagaattcacacaggtgagaagcctttctcatgcacaacctgtgaaaaa
agatttgcctataaacacactttaaccaatcacatgagaattcacacaggggagaagcct
ttcgtatgtgtaatctgtgggaaaggttttgctcaaaaaggtggtttagtcacacacacc
aaaggtcacatgggtgagaggcctttcaactgtaatacttgtgggaaacgttttagtcaa
tcaactcttttagctactcacatgacaacacacatggatgagaaacacttttcgtgtggg
acctgtggaaagagttacagtaaaaaaaagagtttaacttatcacataagaattcacaca
ggtgagaggcctttctcttgtgccacttgtggaaaaagtttccgaggcaaatctaattta
cgttatcacatgaggactcacacacgttag
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