Xiphophorus couchianus (Monterrey platyfish): 114157185
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Entry
114157185 CDS
T05908
Symbol
rab39b
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114157185 (rab39b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114157185 (rab39b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xco04031
]
114157185 (rab39b)
Membrane trafficking [BR:
xco04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
114157185 (rab39b)
GTP-binding proteins [BR:
xco04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
114157185 (rab39b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_22
VGCC_beta4Aa_N
TniB
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
114157185
NCBI-ProteinID:
XP_027893847
LinkDB
All DBs
Position
14:complement(6788750..6799967)
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVTRQEAEKLAGAYGMRYIETSARDAINVEHAFTELTREIFALVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatctggctctaccagttccgcctcatcgtcatcggggactccacggtgggc
aagtcgtgtctgatccggcggttcacggagggtcgcttcgcccaggtgtccgaccccacc
gtgggcgtggacttcttctcccgcctggtggagatcgagcccgggaagcggatcaagctg
cagatctgggacaccgcggggcaggagcgcttcaggtccatcaccagagcttattaccgt
aactctgtgggcgggctcctcctcttcgacatcaccaaccgccgctccttccagaacgtc
cacgactggctggaggaggcgcgcagccacgtccagccgcacagcatcgtcttcctgctg
gtgggccacaagtgcgacctcgaggcacagcgccaggtgacccggcaagaagcggagaag
ctggccggggcgtacggcatgcgctacatcgagacgtcggcgcgcgacgccatcaacgtg
gagcacgccttcaccgagctgaccagggagatcttcgccttggtgcggtccggcgacatc
accatccaggagggctgggagggcgtgaagagcggcttcgtgcccaacgtggtccactcg
tcagaggaggtgaccaagagcgaccgccgctgcctctgttga
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