Xiphophorus couchianus (Monterrey platyfish): 114159915
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Entry
114159915 CDS
T05908
Symbol
ldlr
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114159915 (ldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114159915 (ldlr)
Membrane trafficking [BR:
xco04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
114159915 (ldlr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
114159915
NCBI-ProteinID:
XP_027897977
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All DBs
Position
16:complement(20545294..20557252)
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AA seq
899 aa
AA seq
DB search
MRLPLILVICLFGHTEALTQKPSQFLCGNGKSITSTWVCDGTDDCGDGTDELPGTCVDKT
CKPTEFRCRGHVTLCIPSTWRCDGETDCVSGADEQNCAAKQCSDSEFRCTSGQCVSSSFV
CDKDADCNDGSDEASCPPITCSSASFQCNNSVCVPRLWACDGDADCSDGSDEWPQNCATR
TPTRAPIHQCSLQEYQCGNGECVHVSWRCDGDTDCLDRSDEAGCAHSTCRPDEFECGDGT
CIHGSNQCNHRYDCTDMSDEVGCINVSHCDGPNRFRCHSGECVSMERVCDNKRDCRDWSD
EPLRECGSNECLYNNGGCSHICNDLKIGYECLCPAGYSLVAKRRCEDIDECANPETCSQI
CINQMGGYKCDCEEGYHIDPATQACKAVGTTPYLFFTNRHEVRKMTLDRSEYTRVIPRLK
NVVALDMNVATQEMYWSDLSLKKIYRTPMDSAEDFSHHNVVIGSDIDGPEGIAFDWVHGN
LYWTDGIRKTVSVVTADGSRRKTLFHQDLSKPRAIVVDPHSNFIYWTDWGSPAKIEKGGL
NGVDRTALVTDNIVWPNGITIDLLNQRLYWVDSKLHTLSSIGVQGGGRRTLIIDEDKLAH
PLGLTVFEERVFWTDVSNNAILSANRLTGGDITPVAEHLSSPEDIVLYHNLKQPAGRNWC
QVSNSTCEFMCLAAPQIGTHPPKYTCVCPDNTMLAGDMRTCVPAVPTPSASSESQASTTH
PPVVPTTPPKTTPPKTTQKPRVPITTTVPPIITTTATKSVRHPTRPVVWTTTPLPKKPSP
QPEKPKILQTTTVAPVTTPGVPPKGVAVIPETTSSTSKTLYFVLPLAILCLVAVGGVLLW
RYYRLQNTNTMHFHNPVYQKTTEDQVHIWRSQSLEGYAYPKRQIVSLDEEADNPSFIEN
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgagactccctctgattcttgtcatctgcctctttggtcacaccgaggctttaacccag
aaacccagccagttcctctgtgggaatgggaagagcatcacatccacctgggtgtgtgat
ggcacagacgactgcggagacggcacagatgagcttcccggaacctgcgtggacaaaact
tgcaaaccaacggagttcaggtgcaggggtcacgtgaccctgtgcataccaagcacctgg
cgctgtgacggagaaacggactgcgtcagtggagccgatgaacagaactgtgctgccaag
cagtgctcagactccgagtttcgctgcacgagcggccagtgcgtctcctcctcctttgtg
tgcgacaaagatgccgactgcaatgacggcagcgacgaggcctcctgcccgccaatcacg
tgcagcagcgcgtccttccagtgcaacaacagcgtttgtgttccccggctgtgggcctgc
gacggcgacgcagactgctccgacggctcggacgagtggccccagaactgcgccacgagg
acccccacgcgcgctcccattcaccagtgctccctccaggaataccagtgcggcaacggg
gagtgcgtccatgtcagctggaggtgcgatggcgatactgactgtcttgatcgatccgat
gaagctggatgtgctcattccacgtgtcgccctgatgagtttgaatgcggcgatggtacg
tgcatccacggcagcaaccaatgcaaccaccggtacgactgcacagacatgagcgacgaa
gtcggctgcatcaacgtgagccactgcgacggtccgaaccggttcaggtgtcacagcggg
gagtgcgtaagcatggagcgggtatgcgacaacaagcgtgactgcagggactggtcagac
gagccgcttagggagtgcggctccaacgagtgcctctacaacaacggcggctgttctcat
atctgcaacgacctgaagattggctacgagtgcctgtgtccagctggatacagcctcgtc
gctaagagacggtgtgaagacatcgatgagtgcgcaaacccagaaacctgtagccaaatc
tgcatcaaccagatgggcggttacaaatgcgactgtgaggaaggttatcatattgacccg
gcgacgcaagcttgcaaagctgttggtacaacaccttaccttttcttcaccaaccgccac
gaggtcagaaagatgaccctggacagaagtgagtacacaagagtgatcccccgattaaag
aacgtggtggccctggacatgaacgtagcaacacaagagatgtactggtccgatctttca
ctgaagaaaatctacagaaccccaatggactcagcagaggacttctcccatcacaatgtg
gtgataggcagtgacatcgatggtcctgaaggaatagccttcgattgggtccacggcaac
ctgtactggactgacggcattcggaagactgtctccgtggtaaccgctgacggtagccgc
cgcaaaaccctctttcaccaagacttatcgaagccccgtgccattgtggtggacccacat
tccaacttcatctactggaccgactgggggagtcctgcaaagatcgaaaagggaggcctt
aatggagtagaccgcaccgctctggtcacggacaacatcgtgtggcctaatggcatcaca
atagacctgctgaaccagcgcctctactgggtggactctaagctgcacacgctctccagc
atcggcgtgcaaggcggcggtcggcgcaccctgatcattgacgaggacaagctggctcac
ccgctgggactcaccgtattcgaggaaagagtgttctggacagacgtcagcaataacgcc
atcctcagcgccaacaggctgactggtggtgacatcacaccggtggcggaacatctttcg
tcccccgaggacatcgttctttaccacaacctcaagcaacctgctggaaggaactggtgc
caggtgtccaacagcacctgtgaattcatgtgcctagctgccccccaaataggcacccac
cccccaaaatacacctgtgtctgtccagataatacgatgctagcaggggatatgaggaca
tgtgtgcctgctgttccaactccttcagcttcttcagagtctcaggcctcgactacccac
cctcctgttgtccctacaacgccaccaaagacaacgccaccaaagacgacgcagaagccc
cgggttccaattactaccacagtgcctcccataatcaccactacagccaccaagtcagtg
cggcatcccactaggcctgtggtttggaccaccacacctttaccaaagaagccctcccct
cagccagaaaagcctaaaatcttgcagactaccacagttgctcctgtcacgactccaggt
gttccacctaaaggtgtcgcagttatacccgaaactacctccagcacctcaaaaacgctt
tactttgtccttcctctagcgatactttgtctggtggccgtcgggggcgtgttgctgtgg
agatactacaggctccagaacaccaacacaatgcactttcataaccccgtctatcagaaa
accactgaggaccaggttcacatctggaggagccagagcctggaaggttacgcctaccct
aaaagacaaattgtgagcttggacgaagaggcggacaatccttccttcattgaaaactga
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