Xiphophorus couchianus (Monterrey platyfish): 114160303
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Entry
114160303 CDS
T05908
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
114160303 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114160303 (srebf1)
04131 Membrane trafficking [BR:
xco04131
]
114160303 (srebf1)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
114160303 (srebf1)
Membrane trafficking [BR:
xco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
114160303 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
114160303 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
SHNi-TPR
ZapB
Motif
Other DBs
NCBI-GeneID:
114160303
NCBI-ProteinID:
XP_027898653
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All DBs
Position
16:13630281..13644768
Genome browser
AA seq
1178 aa
AA seq
DB search
MNRLSFDDPSLDLDPTLSLNDPSEIDTVLLSDIDDMLQLINNQDMEFGGLFDPTPFSGSP
STQEMNALSQTITSASPPATTPTPSSTTTSSILSSNPHLDALLGPPISRSSSAPDKAFQP
ATFQQSPLAQVPSSAQRQQQPLSSQQAQSLRQPLVEQPQPSVSPPAAAQAAASPHGSPGP
NPAFSSTTQTLFTSPAPQTAPQPQAQPQAQSNFQSQSSFTAVGRSSMSSPATSLSSSPPS
VQPVTIQTQLQGLTTASPLLTTSASPPAQTITTQVQQVPVLLQPQFIKAESVLLTTLKPD
PCMVTTMASPTSLVTTTSSVQSTSLQAFMGGGTILTTVPVMVDAEKLPINRIAIAGKPSG
QPHKGEKRTAHNAIEKRYRSSINDKILELKDIVAGTEAKLNKSAVLRKAIDYIRYLQQTN
QKLKQENMALKMAAQKNKSLKDLVAMEVDTQAEVKNELPTPPASDVGSPTSFSRCSSDSE
PDSPMGEDTKSNLGLLDQSAAGGVVGGMLDRSRMALCAFTFLFISLNPLAALLCSSGSSS
AGNNADINPHHAGRSVLGVDTPDESWGWMDWMLPTILVWLLNGILVSGVLIRLLVYGEPV
TRPHSGSSVLFWRHRKQADLDLARGDFAQASHNLRTCLKALGRPLPISQLDLACAVLWSL
LRFCLQRLWVGRWLAARAGGLRSDRPLQEDAGKSSRDAALVYHRLHQLHMTGKLNGSHLS
AVHMALSAVNLAECAGSCLPVASLAEVYVSAALRVKASLPRILHFTSRVFLSSARQACLS
SSGCVPPAMQWLCHPLGHRFFVDGDWAIRSTPKESIYSQAGNTVDPLAQVTQAFREHLLE
KALYCVAQPHGEKSPNQADGEYADALEYLQLLISASDAAGATSQSFAIVSNMAIVTGCDP
HSKWWSSVAIVIINWLQGDDAAAERLYPTVEHLPRSLQNAESLLPKACLNTFRAVRALLS
KPENCQLSLSHTDKASALLRDSLNLGPHCHSSSLDKVVELMVCDLLLVLRTNIWRLQQQG
TSPTGSGLVGSSGPASLHQASPPELQGFQQDLCSLRKLAHSFRPAMRRLFLHEATARLMA
GASPTRTHQLLDRSLRRRATPGAKTEECEARPGQREQAEAVMLACRYLPPSFLSAPGQRV
GMLADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTSS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcctgtcttttgacgatccttcgctggatctggatccaacactgtctcttaac
gacccaagtgaaattgacacggtcctcttaagcgacatcgatgacatgcttcagctcatc
aacaatcaggacatggagtttggaggactctttgatcccactcccttctcagggagccct
tccacccaagagatgaatgccttgtcccagaccatcacctctgcttcacctcctgccacc
actcccacaccttcatccaccaccacttcctccatcttgagcagcaacccccacttagac
gccctgttgggcccgcctatcagccgcagctcctcggccccggacaaggccttccagcct
gctaccttccagcagtctcccctggctcaggtacccagctccgcacagaggcagcagcaa
ccgttgtcgagccagcaggctcagagcctcagacagcccctggtggagcagccccagccg
agcgtcagcccacctgccgccgcgcaggcagcagcgtcccctcacggctcgccaggtcca
aatccggctttcagctccacgacacagacactcttcacatcccctgcgcctcagactgcg
cctcagccccaggcacaacctcaggcccagagcaactttcagagccaaagtagctttacg
gccgtcggccgcagcagcatgagctctcctgccaccagcttatcgtcctcgcctccaagt
gtccagccagtgaccattcagacccagcttcaaggcctgaccactgcctcccccctcctg
accacctcagctagccctccagcacagactattacaacccaagtacaacaagtacctgtg
ctgctgcagccccagttcataaaggctgaatccgtgctgctcaccactttaaagcctgac
ccttgtatggtcacaaccatggcctcccctacgtctctagtgaccaccaccagctcggta
cagagcacatccctgcaggcttttatgggtgggggtaccatcctgaccaccgtgcctgtg
atggtggatgcggagaagcttcccatcaaccgcatcgccatcgccggcaagccgtcaggc
cagccgcacaagggggagaagcgcaccgctcacaacgccatcgagaaacgctatcgttcc
tccatcaacgataaaatattggagctgaaagatattgtcgctggcactgaagccaagctc
aacaagtcggctgtcctcaggaaagccatcgactacatccgctacctgcagcagacgaat
cagaagctcaaacaggagaacatggctctgaaaatggcagctcagaagaacaagtctctc
aaagacctggttgccatggaggtggacactcaggcagaagtgaagaacgagctgcccact
ccgccagcctccgacgtcggctcccctacctcgttctcgcgctgtagcagtgactcggag
cctgacagtcccatgggagaggacacaaagtcaaatttaggcttgctggaccaatctgca
gcaggtggcgtggttggaggcatgctggaccgctcccgcatggcgttgtgcgcctttacc
ttcctcttcatctccctcaacccactggctgctttgctctgctcatctggcagcagctct
gcaggaaacaatgcagacattaacccccatcatgccggaagaagcgtcttgggtgtagat
actccagatgagtcttggggctggatggattggatgctccccaccatattggtgtggctg
ctgaacggtattctggtgtcaggagttctgatccgattgttggtttacggcgagcccgtg
acccgtccgcattcagggtcgtccgtgctgttctggagacaccgcaaacaggccgacctg
gacctggccagaggggattttgctcaggccagtcataacttacgaacctgtcttaaggcg
ctgggtcgccccctgcccatctcccagttggacctggcctgcgcggtgctctggtccctg
ctgaggttctgccttcagcgcctctgggtcggccgctggctcgccgcaagggctggaggt
ctgcgcagcgatcgccccctgcaggaggatgcgggtaaaagcagtcgtgatgccgccttg
gtttatcaccgcctgcatcagcttcacatgacagggaagctaaacggcagccacctgtca
gcagtccacatggctttaagtgcggtgaacctggcagaatgtgctggctcatgcctgcct
gtagccagtctggctgaggtctacgtctctgcagcgctacgagtcaaagccagcctgcca
aggatcctccattttacctctcgtgtgttcctgagcagcgcccgccaggcgtgcctgtca
tccagcggctgcgtgcctccggccatgcagtggctctgtcaccctctcggccaccgcttc
ttcgtggacggggactgggccattcgcagcacgcctaaagaaagcatctacagccaggct
ggaaacactgtggaccctctggcccaggtgactcaggctttcagagaacacctccttgaa
aaagctctttactgcgtcgcccagccgcacggagagaagagtcccaaccaggctgacggg
gagtatgccgatgccttggagtacctccagctgttgattagtgcgtctgatgccgccggt
gcaacatcccagtcctttgcaattgtctccaacatggctatagtgactggctgcgacccc
cactctaagtggtggtcctcggttgccatagtgatcatcaattggcttcaaggagatgat
gctgcagcagagaggctctatccaactgtggagcacctgccccgcagcctgcagaacgca
gagagtcttctgcccaaagcgtgcctcaacacattcagggcagtcagagctctgctgtcc
aagccagaaaactgccagctgagtctgagccacactgacaaggccagcgccctgctccga
gacagcctcaacctgggaccgcactgccacagctccagcttagacaaggtcgtcgagtta
atggtgtgcgacctcctgctggttttgaggaccaacatctggcgcttgcagcagcaagga
acgagtcctacagggtccggcttagtgggctccagcggtcctgccagccttcatcaggcg
tcgccaccagaacttcagggcttccagcaagacctctgctccctgcgcaagctggcacac
agcttcagacctgcaatgcgaagattgttccttcacgaagccactgccaggctgatggcg
ggggccagtcccaccagaacccatcagctactggaccgctcactgcggcgccgagcaaca
cccggagccaagacagaggagtgcgaggcgcggcccggccagcgggagcaggccgaggct
gtgatgctggcctgccgctaccttcctccctccttcctgtcggccccgggccagagggtg
ggcatgctggccgacgcggcccgcaccctggagaagctcggcgacaagaggacgctccac
gactgccagcagatgatcataaagctggggagcggcaccaccgtcaccagcagctag
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