Xiphophorus couchianus (Monterrey platyfish): 114161002
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Entry
114161002 CDS
T05908
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 1-like isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114161002
Membrane trafficking [BR:
xco04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
114161002
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
114161002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
114161002
NCBI-ProteinID:
XP_027899804
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Position
17:456974..487052
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AA seq
1087 aa
AA seq
DB search
MSNSNKSKKDKEILAEYESQVKDVRAQLAEQQRCLEQQTEMRVQLLQDLQDFFRKKAEIE
TEYSRNLEKLAERFMAKTRSTKDHQQYKKDQNLLSPVNCWYLLLNQVRRESKDHATLSDL
YLNNVISRLTHISEDSARLLKRSKEILQQLQDDLMKLLNELYTVMKTYHMYNAEMISAET
KLREAERQEGRVKGVSGSGGGVEPVFGLRIEERHQRRNAARKMEKMREKRKAKYSENKLK
TLKARNEYLLTLEATNASVFKYYIHDLPDIIDCCDLGYHSSLSRALKTYLSAELSLEASR
RAGLEVLEGAVENLDPARDRQRLLGLYPTAFCPPQRFGFQAHMGDTTTQIASQPQVQAEL
SLRLTQLQTRLASLKIENEEVKKTWGATLTTLQDMTVLDDCDVSQSFTHSPSSESVKSSV
SDGYLNKPSLAKRRANQQETELFYFNKFREYLEGSNLISKLQAKHDILKKALAEGYKSEL
LTTSRGRKNSHSKHQDSTKAIPLLVESCIRYINLHGLQHQGIFRVSGSQVEVNDIKNCFE
RGNDPLIDEESNHDINSVAGVLKLYFRGLENPLFPKDRFNDLISCVRMENLYERAQCIRK
ILLGVPRATLVVMRYLFAFLNHLSQYSDENMMDTGNLAIVFGPTLLPTPDALDQVACQAH
VNEVIKTVILHHDNIFPDIKELPGPVYEKCMTGDQYCESPFSEPGALEETEPDAGTETQT
SDEAEGEAVEAVARFDYVGRSGRELSFKKGASLQLFQRASHDWWEGRLNGSRGLVPHQYI
VVKDRRVNSPKWADAMSDTLSQKADSDGGSSSTEDKRSRSELSSPTDIRPPENFNSHRRK
RTDGLFRRPLCRSNDNHGNSGVMERSSPPVTGHFSPRDLLLGRGQGMTPPLDSPERRRRS
AAVTMTVSRHDSLRRPEDTPIRRSSSGQHSFSDSLRSRVMDAETLAQDIEETVSVALGEL
RQLERPDRRPAPDVVLDTLDQVKNGPVASCSSESPSPHSTPSTPGTPGTPGTPGTPSPLS
PMSPISPLPGPPRPANPSPDALGSFKPVAAARMGAPLRPPALRPKPAVPPKSSTPPLAPP
LDKSCTM
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaactcaaacaaaagcaagaaggacaaagaaatcctggcagaatatgagagccaa
gtgaaagatgtgcgggcccagttggcggagcagcagcgctgcctggagcagcagacggag
atgcgggtgcagctgcttcaggacctgcaggacttcttcaggaagaaggccgagatcgaa
acggagtattccaggaacctggagaagctcgcagagcgcttcatggccaaaacacgcagc
acaaaagatcatcagcaatacaagaaggatcagaatctgctttctccggttaactgctgg
tacttgttgctaaaccaggtgaggagggagagcaaagaccacgccaccctcagtgatctc
tacctgaacaacgtcatcagccgtctgacgcacatcagcgaggattcggctcggctcctg
aaaaggagtaaagaaatcctccagcagctgcaggacgacctcatgaagcttctgaacgag
ctttacacggtgatgaagacgtatcacatgtacaacgcggagatgatcagcgcggagacc
aagctgcgggaggcggagcggcaggagggccgcgtgaagggcgtgtccgggtcgggcggc
ggggtggagcctgtgttcggcctgcggatagaggagcgccaccagaggcgcaacgccgcc
cgcaagatggagaagatgagagagaagaggaaggcgaaatactcggagaacaaactgaag
actctgaaagccagaaatgagtatttactgactctggaggcgaccaatgcctccgtgttt
aaatactacatccacgatctgcccgacatcatcgactgctgtgacttagggtaccactcc
agtctgagccgggcgttgaagacctacctatccgccgaactgagccttgaagcctccagg
cgggcgggcctggaggtgctggagggggctgtggagaacctggacccggcccgcgacagg
cagcgtctgctgggcctctaccctactgccttctgcccaccgcagcgcttcggattccag
gcgcacatgggcgacacaacgacccagatcgcctcccagccgcaggtccaggctgagctg
tcgctgcgcctcactcagctccagacccgcctggcgtccctgaagatcgagaacgaagag
gtgaaaaagacctggggagccactctgaccacgctgcaggacatgacggtgctggacgac
tgcgacgtgtcgcagagcttcacccacagcccgtcctccgagtcggtcaagtccagcgtg
tcggacggctacctgaacaaacccagtctggccaagagacgagccaaccagcaggagacg
gagcttttctacttcaataagtttcgcgagtatttagagggaagtaatctcatctcgaaa
ctccaggccaaacatgacatattaaagaaagccttagctgagggatataaatctgaatta
ctgactaccagtcgtgggcggaagaactcccatagcaagcaccaggattcaactaaagcc
ataccgctgctagtggaaagctgcatccgctacattaatctacacggtcttcagcatcag
ggcatcttccgggtttcaggctcacaggtagaggtcaacgacatcaagaactgcttcgag
agaggtaacgacccgctcatagacgaggagagcaaccacgacatcaactctgtggccggg
gtgttgaagctgtacttcaggggtttggagaaccctctgtttccaaaggacaggttcaac
gacctcatttcctgcgtccggatggaaaacctgtatgagagagctcagtgcatcaggaag
atcctgctgggcgtcccgagggccacactggtggtgatgcgctacctgttcgccttcctc
aaccacctctcccagtacagtgatgagaacatgatggacactgggaacctggccatcgtg
ttcggccccaccctcctgccgacgcccgacgcgctggaccaggtggcctgccaggcgcac
gtcaatgaggtcatcaaaacggtcatcctgcaccacgacaacatctttcccgacatcaag
gagcttccaggcccggtttatgagaagtgcatgaccggcgaccagtactgcgagagtccg
ttcagcgagcctggggccctggaggagaccgagccggacgccggtaccgagacccagacc
agcgacgaggcagagggcgaggccgtggaagcggtggcccggttcgactacgtgggccgg
tccggccgcgagctgtccttcaagaagggcgcgtcgctgcagctgttccagcgcgcgtcg
catgactggtgggagggccggctgaacggcagccgcggcctggtgcctcatcagtacatc
gtggtgaaggacaggcgagtgaacagtcccaaatgggcggatgccatgtccgatacgctc
agccagaaagccgacagcgacggggggagcagcagcaccgaggacaagcggtcccgcagc
gagctgagctccccgaccgacatcagaccgccggagaacttcaacagccacaggaggaaa
cgaaccgacggtctcttccgccgccctctctgtcgctccaacgataaccacggcaacagc
ggcgtgatggagcggagctctccgcccgtgacgggtcacttcagccccagagatctcctc
ctagggcggggccagggcatgaccccgcccctcgacagcccggagcgccggcgccgctcc
gccgccgtcaccatgacggtgagccgccacgactcgctgcggaggccggaggacacgccc
atacggcgctccagcagcgggcagcacagcttcagcgactcgctgcgatccagagtgatg
gacgccgagacgctggcccaggacatcgaggagacggtgagcgtcgccctgggcgagctg
cggcagctggagcggccggaccgccggccggcgcctgacgtggttctggacacactggat
caggtgaagaacggcccggtcgccagctgctcctccgagtcgcctagccctcacagtacg
cccagtacgccggggacgcccggcaccccggggacgcccggcacccccagcccgctcagc
cccatgagccccatcagcccgctgcccggcccgcccaggcccgccaacccgtcccccgac
gccctgggctctttcaagccggtggcggctgcccgcatgggcgccccgctgcggcccccc
gccctgagacccaaacccgcggtgccccccaaaagcagcaccccgcctctggcgcccccg
ctggacaaatcctgcaccatgtga
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