Xanthomonas campestris pv. raphani: XCR_0893
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Entry
XCR_0893 CDS
T01872
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00470
D-Amino acid metabolism
xcp00550
Peptidoglycan biosynthesis
xcp01100
Metabolic pathways
xcp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XCR_0893
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XCR_0893
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
XCR_0893
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xcp01011
]
XCR_0893
Enzymes [BR:
xcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
XCR_0893
Peptidoglycan biosynthesis and degradation proteins [BR:
xcp01011
]
Precursor biosynthesis
Amino acid ligase
XCR_0893
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
ATP-grasp
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AEL05810
UniProt:
G0CDA7
LinkDB
All DBs
Position
934178..935134
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AA seq
318 aa
AA seq
DB search
MSAQIAPSRISDPAMFGRVAVLLGGTSSEREVSLNSGSNVLDALRARGVDAQPVDGIPAL
AQALVAQRFDRVFNVLHGHNGGGEDGIVQGLMEAFGVPYTGSNVLGSALSMDKIRTKQVW
LSLGLSTPRYARLAAGASAQQIHAAAGQIGLPVIVKPANEGSSVGVSRVFDQAQLEEAVT
LAARYDGALLMEQLIEGDELTVAVLGDVALPSIRIVPKGQWYDYNAKYIAEDTQYLCPGL
DGDAEAQIGQLALDAFRAAGCSGWGRVDVMRDGSTGQLYLLEVNTAPGMTSHSLVPKAAR
QLGIDFEALVWRVLEQTL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcacagatcgccccctcgcgcatcagcgacccggccatgttcggccgggttgca
gtgctgctcggcggcacctcgtccgagcgcgaggtctcgctcaactccggcagcaatgtg
ctcgatgccctgcgcgcgcgcggcgtcgatgcgcagccggtcgacggcattccggcattg
gcgcaggcattggtcgcgcagcgcttcgaccgcgtcttcaacgtgctgcatggtcacaac
ggcggcggcgaagacggcatcgtgcaggggttgatggaggccttcggcgtgccgtacacc
ggctccaacgtgctcggctcggcgctgagcatggacaagattcgcaccaagcaggtctgg
ctgtcgctgggcctgtccacgccgcgctacgcacggcttgccgccggcgccagcgcgcag
cagatccacgccgctgccgggcagatcggcttgccagtgatcgtgaagccggccaacgaa
ggctccagcgtcggcgtcagccgcgtgttcgaccaggcgcagctcgaagaggccgtgacg
cttgccgcacgctacgacggcgcgctgctgatggaacaactgatcgaaggcgacgagctc
actgtcgccgtgctcggcgatgtggcgctgccgtcgatccgcatcgtgcccaagggccag
tggtacgactacaacgccaagtacatcgccgaagacacgcagtacctgtgcccgggactt
gatggcgacgcagaagcacagatcggccagctcgccctggatgcgttccgcgccgccggc
tgcagcggctggggtcgcgtggacgtgatgcgcgatggcagcaccggccagctgtacctg
ctggaagtgaacaccgccccgggcatgaccagccactcgctggtgcccaaggccgcccgc
caactcggcatcgacttcgaagcgctggtctggcgcgtgttggagcagacgctatga
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