Xanthomonas campestris pv. raphani: XCR_4301
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Entry
XCR_4301 CDS
T01872
Name
(GenBank) D-alanine--D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00470
D-Amino acid metabolism
xcp00550
Peptidoglycan biosynthesis
xcp01100
Metabolic pathways
xcp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XCR_4301
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XCR_4301
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
XCR_4301
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xcp01011
]
XCR_4301
Enzymes [BR:
xcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
XCR_4301
Peptidoglycan biosynthesis and degradation proteins [BR:
xcp01011
]
Precursor biosynthesis
Amino acid ligase
XCR_4301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
GARS_A
RimK
Motif
Other DBs
NCBI-ProteinID:
AEL09157
UniProt:
G0CLW4
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All DBs
Position
4613287..4614393
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AA seq
368 aa
AA seq
DB search
MRRIRVGLIFGGKSAEHEVSLQSARNILQALDPQRFEPVLIGIDKQGQWHLSAPESFLLD
ADDPSRIALRHSGRGLAVLPGAASAQLCAVDAEQALAQIDVVFPIVHGTLGEDGSLQGLL
RMANLPFVGSGVLGSAVAMDKDMTKRVLRDAGLEVAPFACFTRHTAAQADVQTLIAQFGL
PLFVKPANQGSSVGVSQVRSAEEFSAALELALRYDHKVLVEAAIAGREIECAVLGNATPQ
ASVCGEVVVHDAFYSYQTKYIRDDGAATVIPADIDAHTQHRIQQCALQAYQALDCAGMAR
VDVFLCADGRIVINEVNTLPGFTRISMYPKLWEASGLDYRSLVTRLIELALERHADDGRL
HSSVVTHA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggattcgggtcggactcatctttggcggcaagtcggccgagcacgaggtctcg
ctgcaatcggcgcgcaacatcctgcaggcgctggacccgcagcggttcgagccggtgctg
atcggcatcgacaaacagggccagtggcacctcagcgcaccggagagttttctgctcgat
gccgacgaccccagccgcattgcgctgcgccacagcggccgcgggctggccgtgctgccc
ggtgccgccagtgcgcagctgtgcgcggtggatgccgaacaggcgctggcgcagatcgat
gtggtgttcccgatcgtgcacggcacgctgggcgaagacggctcgctgcaggggctgctg
cgcatggccaatctgccgttcgtgggttccggcgtgctgggatcggccgtggcaatggac
aaggacatgaccaagcgggtgctgcgcgatgccggcctggaggtggcgccgttcgcatgc
tttacgcgccacaccgctgcgcaggccgacgtgcaaacgctgattgcccaattcgggctg
ccgttgttcgtcaagccggccaaccagggctcgtcggtcggcgtcagccaggtccgcagc
gctgaggagttcagcgctgcattggagctcgcgctgcgctacgaccacaaggtgctggtg
gaagcggcgatcgccgggcgcgagatcgaatgcgcggtgctgggcaatgccacgccgcag
gccagcgtgtgcggcgaggtggtggtgcacgacgcgttctattcgtaccagaccaagtac
atccgcgacgatggcgcagcgacggtgattcccgccgacatcgacgcccacacccagcac
cgtatccagcagtgcgcactacaggcctatcaggcgctggactgcgccggcatggcgcgc
gtggatgtgttcctgtgcgcggatgggcgcatcgtcatcaacgaggtcaacaccctgccc
ggcttcacccgcatcagcatgtatcccaagttgtgggaggcaagcgggctggactatcgc
agtctggttacgcgcttgatcgagctggcactggagcggcatgccgacgatgggcgcctg
cacagcagcgtggtcacgcacgcgtga
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