Xanthomonas campestris pv. raphani: XCR_4405
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Entry
XCR_4405 CDS
T01872
Name
(GenBank) alpha-amylase family protein
KO
K05343
maltose alpha-D-glucosyltransferase / alpha-amylase [EC:
5.4.99.16
3.2.1.1
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00500
Starch and sucrose metabolism
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
XCR_4405
Enzymes [BR:
xcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
XCR_4405
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.16 maltose alpha-D-glucosyltransferase
XCR_4405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
Mak_N_cap
Glyco_hydro_77
DUF3459
Motif
Other DBs
NCBI-ProteinID:
AEL09261
UniProt:
G0C9Z0
LinkDB
All DBs
Position
complement(4715148..4718498)
Genome browser
AA seq
1116 aa
AA seq
DB search
MNAVPALQADAEQSAVVADQLWYKDAIIYQVHVKSFFDSNDDGIGDFPGLISKLDYIAEL
GVDTIWLLPFYPSPRRDDGYDIAEYMAVHPDYGTIADFEQLVAQAHARGIRIVTELVINH
TSDQHPWFQRARNAPAGSPERDFYVWSDTDQEYEGTRIIFCDTEKSNWTWDPVAGQYFWH
RFYSHQPDLNFDNPAVLESVLEVMRFWLDRGVDGLRLDAVPYLIERSGTSNENLPETHAI
LRKIRATLDAEYPDRMLLAEANMWPEDTQQYFGQNADECHMAFHFPLMPRMYMAIAREDR
FPITDIMRQTPEIPETCQWAIFLRNHDELTLEMVTDSERDYLWQTYASDRRARINLGIRR
RLAPLLERDRRRIELMTSLLLTMPGTPVLYYGDEIGMGDNIHLGDRDGVRTPMQWSIDRN
GGFSRADPAALVLPPVMDPLYGFQAVNVEAQIRDQHSLLTWTRRVLSVRKRYQAFGRGTL
RFLYPGNRRMLAYLRCYQDETVLCVANLSHTLQAVELDLSEFEGRVPVDIIGGGSFPPIG
RLTYLLTVPPFGFYAFQLVSEGTLPDWHVPSPVPLPDYRTLVLRSDTEESAALLPHLATL
EGEILPAWLSARRWFSAKDQALKSVRISRRTPLPGDEPMSLLELDVELEDGHHECYMLPV
GIVWEREHPSTLAEQLALARVRQGREVGYLTDAFALKPMVRGVIDALRHDAALDFHDGDD
ASQQGQVRFESTPALAALEIPDDPEIRWLSAEQSNSSLVVADKAVFKLLRHVATGANPEI
EIGRRLTEMGYANAAPLLGSVSRVDAQGTITTIALLQGFIRNQGDAWRWTLDHLARSFDE
YATAQTDEARNEAVAGYDAFAAVVGKRLAELHEALSRSTDDADFAPQRIDLPTANDVVGG
VARQVEEMWETVHARLGATDDAAEREALESVLAERPQLDALLAKAPSVLAESLLTRVHGD
FHLGQILVAFDDVVLIDFEGEPAKPLAERRAKASPLRDVAGFLRSLDYASEVSARGEEGT
AARAGVGVDAHLDDFLVEFRRRSTQAFLDAYHAVLDASAHPWIAPAAFNAATLLFLVEKA
CYEVRYEAANRPGWLMVPIQGLRRILQRARAGAGDT
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagttccagcccttcaggctgacgcagaacaatcggcagtggttgccgaccag
ctttggtacaaggacgcgatcatctaccaggtgcacgtcaagtcgttcttcgactccaat
gacgatggcatcggtgatttccccggcctgatctccaagctggactacatcgccgaactg
ggcgtggacacgatctggctgctgccgttctaccccagcccgcgccgcgacgacggctac
gacatcgccgaatatatggcggtgcatccggactacggcaccatcgccgacttcgagcag
ctggtggcccaagcgcatgcgcgcggcatccgcatcgtcaccgagttggtgatcaaccac
acctccgatcagcacccctggttccagcgcgcccgcaacgcgccggctggttcgccggag
cgcgacttctatgtctggtcggacaccgaccaggaatacgaaggcacgcgcatcattttc
tgcgataccgaaaagtccaactggacctgggacccggtggccggccagtacttctggcac
cggttctattcgcaccagcccgatctcaacttcgacaacccggcggtgctggaatcggtg
ctggaagtgatgcgcttctggctggaccgcggcgtggacggcctgcgcctggatgcggtg
ccgtatttgatcgagcgctccggcacctcgaacgaaaacctgccggaaacccacgccatc
ctgcgcaagatccgcgccacgctggatgccgaatacccggaccgcatgctgctggccgag
gccaacatgtggccggaagacacccagcaatacttcggccagaacgccgacgaatgccac
atggcattccacttcccgctgatgccgcgcatgtacatggcgatcgcgcgcgaggaccgc
ttccccatcaccgacatcatgcggcagacgccggagattccggagacctgccagtgggcg
atcttcctgcgcaaccatgacgagttgacgctggaaatggtcaccgattcggagcgcgat
tacctttggcagacctacgcctcggaccgccgcgcgcgcatcaacttaggcatccgccgc
cgcctggcgccgctgctggagcgcgaccgccgccgcatcgaattgatgacctccttgctg
ctgaccatgcccggcacgccggtgctgtactacggcgatgagatcggcatgggcgacaac
atccatctgggcgaccgcgatggtgtgcgcaccccgatgcagtggtcgatcgaccgcaac
ggtggcttctcgcgtgccgaccccgccgcgctggtgctaccgccggtcatggacccgctg
tacggcttccaggcggtgaacgtggaagcgcagatccgcgaccagcattcgctgctgacc
tggacccgccgcgtgctcagcgtgcgcaagcgctaccaggcattcggccgcggcacgctg
cgctttttgtacccaggcaaccgccgcatgctggcctacctgcgctgctatcaggacgaa
accgtgctgtgcgtggccaacctctcgcacaccttgcaggcggtggagctggacctgtcc
gaattcgaaggccgcgtgccggtggacatcatcggcggtggcagcttcccgccgatcggc
cggctgacctatctgctgaccgtgccgccatttggtttctacgcgttccagctggtcagc
gaaggcacgctgccggactggcatgtacccagcccggtgccgttgccggattaccgcacg
ctggtgctgcgcagcgacaccgaagaaagtgccgcactgctgccgcatctggccacgctg
gaaggcgagatcctgccggcgtggttatcggcacggcgctggttctcggccaaggaccag
gcgctcaagagcgtgcgcatttcgcggcgcacaccgttgccgggcgatgaaccgatgagc
ctgctggagctggatgtggagctggaagacggccaccacgagtgctacatgctgccggtg
ggcattgtctgggagcgcgagcacccaagcacgctggccgagcagctggcgctggcgcgg
gtgcgccagggccgcgaggtggggtatctcaccgacgcgtttgcgctcaagccgatggtg
cgcggcgtgatcgatgcactgcgtcacgatgcggcgctggatttccacgatggcgacgat
gcctcgcaacaaggccaggtgcgtttcgagtcgaccccggcgctggccgcgctggagatt
ccggacgacccggaaatccgttggttgtcggccgaacagagcaacagctcgctcgtcgtt
gcggacaaggcggtgttcaagctgctgcgccacgtggccaccggtgccaatccggagatc
gagatcggccgccgcctcaccgagatgggctacgccaatgcggcgccgctgctgggcagc
gtgagccgggtggatgcgcagggcaccatcaccaccatcgcactgttgcagggcttcatc
cgcaaccagggcgatgcctggcgttggacgctcgatcacctggcgcgcagtttcgacgaa
tacgccaccgcgcagaccgacgaagcccgcaacgaagcggtggccggctacgacgcattt
gccgcagtggtgggcaagcgcctggccgagttgcacgaagcgctctcgcgcagcaccgac
gatgcagacttcgcaccgcaacgcatcgacctgcctaccgccaacgatgtggtgggcggc
gtggcacgccaggtcgaggagatgtgggaaacggtgcacgcccgcctgggcgccaccgac
gatgcggccgaacgcgaggcgctggaatcggtgctggccgaacgcccgcagctggatgcg
ctgctggccaaggcaccaagcgtgctggccgagtcgctgttgacccgcgtgcacggcgac
ttccacctgggtcagatcctggtggcgttcgacgacgtggtgctgatcgacttcgaaggc
gagcccgccaagccgctggccgaacgccgcgccaaggccagcccgttgcgcgatgtggcc
ggtttcctgcgctcgctcgattacgccagcgaagtgtctgcgcgtggcgaagagggcacc
gccgcacgtgccggcgtgggcgtggatgcgcacctggatgacttcctggtggaattccgc
cgccgctccacgcaagcgttcctggacgcttaccatgccgtgctcgacgccagcgcgcat
ccgtggatcgcgccggcggcgttcaatgcggccaccttgctgttcctggtggagaaggcc
tgctacgaggtgcgctacgaagcggcgaaccggccgggctggttgatggtgcccatccag
ggcttgcgacgcatcctgcaacgcgcgcgcgctggtgcgggagacacatga
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