Xanthomonas campestris pv. raphani: XCR_4421
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Entry
XCR_4421 CDS
T01872
Symbol
xylA
Name
(GenBank) xylose isomerase
KO
K01805
xylose isomerase [EC:
5.3.1.5
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00040
Pentose and glucuronate interconversions
xcp00051
Fructose and mannose metabolism
xcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XCR_4421 (xylA)
00051 Fructose and mannose metabolism
XCR_4421 (xylA)
Enzymes [BR:
xcp01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.5 xylose isomerase
XCR_4421 (xylA)
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Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AEL09277
UniProt:
G0CA06
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Position
4733228..4734568
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AA seq
446 aa
AA seq
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MSNTVFIGAKEYFPGIGKIGFEGRDSDNPLAFKVYDANKQVAGKTMAEHLRFAVAYWHSF
CGNGADPFGPGTRAYPWDVGNTALARAEAKSDAAFEFFTKLGVPYYCFHDIDLAPDADDI
GEYENNLKHMVGIAKQRQADTGVKLLWGTANLFSHPRYMNGASTNPDFNVVARAAVQVKA
AIDATVELGGENYVFWGGREGYACLHNTQMKREQDNMARFLTLARDYGRAIGFKGNFLIE
PKPMEPMKHQYDFDSATVIGFLRQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLL
GSIDANRGNPQNGWDTDQFPTDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDL
FLAHIGGMDAFARGLEVADALLTSSPLETWRAQRYASFDSGAGADFANGTSTLADLAKYA
AGKGEPTQVSGRQEAYENLINQYLTR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaccgttttcatcggcgcgaaagaatatttccccggcatcggcaagatcggc
ttcgaaggccgcgattcggacaacccgcttgcgttcaaggtgtacgacgccaacaagcag
gtcgccggcaagaccatggccgagcacctgcgctttgcagtggcttactggcacagcttc
tgcggcaatggcgccgatccgttcggcccgggcacgcgtgcgtatccgtgggatgtgggc
aacaccgcgctggcacgtgccgaggccaagtccgatgccgcgttcgaattcttcaccaag
ctcggcgtgccgtactactgcttccacgacatcgatctggcgccggatgcggacgacatc
ggcgagtacgaaaacaacctcaagcacatggtgggcattgccaagcagcgccaggccgac
accggcgtcaagctgctgtggggcaccgccaatctgttctcgcacccgcgctacatgaat
ggtgcgtccaccaatccggacttcaatgtcgtggcgcgcgctgcggtgcaggtcaaggcc
gcgatcgatgccacggtggagctgggcggcgagaactacgtattctggggcggccgcgaa
ggctatgcctgcctgcacaacacgcagatgaagcgcgagcaggacaacatggcgcgcttc
ctcaccctggcacgcgactacgggcgtgcgatcggcttcaaaggcaacttcctgatcgag
cccaagcccatggagccgatgaagcaccagtacgatttcgacagcgccacggtgatcggc
ttcctgcgccagcacggcctggaccaggatttcaagctcaatatcgaagccaaccacgcc
acgctgtcgggtcacagcttcgagcacgacctgcaggtggccagcgatgccggcctgctt
ggcagcatcgatgccaaccgcggcaacccgcagaacggctgggataccgaccagttcccg
accgacctgtacgacaccgtcggcgcgatgctggtggtgctgcgtcagggcgggctggca
ccgggcggtctgaatttcgatgccaaggtgcggcgtgagtcatccgatccgcaggatctg
ttcctggcacacatcggcggcatggatgcgttcgcacgcgggctggaagtggccgacgcg
ctgctgacctcctcaccgctggaaacctggcgcgcgcagcgttacgccagcttcgacagc
ggcgcgggcgcggactttgccaacggcaccagcacgctggcggatctggccaagtacgcc
gccggcaagggcgagccgacgcaagtcagcggccgccaggaagcctacgagaacctgatc
aatcagtatctgacgcgttga
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